Detailed information NTG0190806

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: B9N48_RS13570
• Genome accession: NZ_CP021169
• Coordinates: 2579338..2580603 (+)
• Length: 421 a.a.
• NCBI ID: WP_086344140.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain TLO3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2574338..2585603

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B9N48_RS13550	yrrB	2575708..2576328 (-)	621	WP_202926392.1	tetratricopeptide repeat protein	-
B9N48_RS13555	mnmA	2576414..2577529 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
B9N48_RS13560	iscSA	2577557..2578699 (-)	1143	WP_042976695.1	cysteine desulfurase family protein	-
B9N48_RS13565	cymR	2578718..2579134 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
B9N48_RS13570	rarA	2579338..2580603 (+)	1266	WP_086344140.1	replication-associated recombination protein A	Machinery gene
B9N48_RS13575	tcdA	2580643..2581407 (-)	765	WP_003229763.1	tRNA threonylcarbamoyladenosine dehydratase	-
B9N48_RS13585	aspS	2581742..2583520 (-)	1779	WP_015384241.1	aspartate--tRNA ligase	-
B9N48_RS13590	hisS	2583534..2584808 (-)	1275	WP_086344141.1	histidine--tRNA ligase	-
B9N48_RS13595	yrzK	2585192..2585362 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46530.38 Da
• Isoelectric Point: 7.2043

>NTDB_id=190806 B9N48_RS13570 WP_086344140.1 2579338..2580603(+) (rarA) [Bacillus subtilis strain TLO3]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESTDGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=190806 B9N48_RS13570 WP_086344140.1 2579338..2580603(+) (rarA) [Bacillus subtilis strain TLO3]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACAACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGC
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAACAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCTAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAATGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCTCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCGGCCATTCTGGCAATCGATGAGGCTCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.525	100	0.995