Detailed information NTG0190575

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: CAH07_RS15300
• Genome accession: NZ_CP021123
• Coordinates: 2927183..2928100 (-)
• Length: 305 a.a.
• NCBI ID: WP_139451253.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SEM-9
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2922183..2933100

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CAH07_RS15275 (CAH07_15095)	spx	2922542..2922937 (-)	396	WP_014476435.1	transcriptional regulator Spx	-
CAH07_RS15280 (CAH07_15100)	yjbC	2923118..2923696 (-)	579	WP_003224597.1	GNAT family N-acetyltransferase	-
CAH07_RS15285 (CAH07_15105)	yjbB	2923860..2925077 (-)	1218	WP_101172486.1	MFS transporter	-
CAH07_RS15290 (CAH07_15110)	oppF	2925183..2926100 (-)	918	WP_003239287.1	oligopeptide ABC transporter ATP-binding protein OppF	-
CAH07_RS15295 (CAH07_15115)	oppD	2926102..2927178 (-)	1077	WP_072173823.1	oligopeptide ABC transporter ATP-binding protein OppD	-
CAH07_RS15300 (CAH07_15120)	amiD	2927183..2928100 (-)	918	WP_139451253.1	oligopeptide ABC transporter permease OppC	Regulator
CAH07_RS15305 (CAH07_15125)	oppB	2928104..2929039 (-)	936	WP_003245554.1	oligopeptide ABC transporter permease OppB	-
CAH07_RS15310 (CAH07_15130)	oppA	2929147..2930784 (-)	1638	WP_015252360.1	oligopeptide ABC transporter substrate-binding protein OppA	-
CAH07_RS15315 (CAH07_15135)	trpS	2931528..2932520 (+)	993	WP_003245134.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 305 a.a.
• Molecular weight: 33607.10 Da
• Isoelectric Point: 10.2873

>NTDB_id=190575 CAH07_RS15300 WP_139451253.1 2927183..2928100(-) (amiD) [Bacillus subtilis strain SEM-9]
MQNIPKNMFEPAAANAGDAEKISKKSLSLWKDAMLRFRSNKLAMVGLIVIVLIILMAIFAPMFSRYDYSTTNLLNADKPP
SKDHWFGTDDLGRDIFVRTWVGARISIFIGVAAAVLDLLIGVIWGSISGFRGGRTDEIMMRIADILWAVPSLLMVILLMV
VLPKGLFTIIIAMTITGWINMARIVRGQVLQLKNQEYVLASQTLGAKTSRLLFKHIVPNAMGSILVTMTLTVPTAIFTEA
FLSYLGLGVPAPLASWGTMASDGLPALTYYPWRLFFPAGFICITMFGFNVVGDGLRDALDPKLRK

Nucleotide

• Length: 918 bp

>NTDB_id=190575 CAH07_RS15300 WP_139451253.1 2927183..2928100(-) (amiD) [Bacillus subtilis strain SEM-9]
ATGCAGAACATTCCAAAAAACATGTTTGAACCAGCCGCAGCGAATGCCGGCGATGCAGAAAAAATAAGTAAAAAGAGCCT
TTCCCTCTGGAAAGATGCGATGCTTCGCTTCCGCAGCAATAAGCTTGCAATGGTCGGGCTTATCGTTATCGTACTTATTA
TCCTTATGGCAATTTTTGCGCCGATGTTCTCAAGGTATGATTATTCAACTACTAATCTCTTAAATGCGGATAAGCCGCCT
TCAAAAGATCACTGGTTCGGAACAGATGATCTTGGACGGGACATTTTCGTCCGTACATGGGTAGGGGCGCGAATCTCAAT
CTTTATCGGTGTTGCAGCCGCTGTTCTTGATTTGCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGAA
GAACGGACGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTT
GTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAGGCTGGATTAATATGGCCAGAATCGTGCGCGG
ACAAGTGCTGCAGCTGAAGAATCAGGAATATGTGCTTGCTTCACAGACACTGGGTGCAAAAACATCCCGTCTTTTGTTTA
AACATATCGTGCCAAACGCAATGGGTTCTATTTTGGTCACGATGACACTGACAGTTCCTACTGCGATTTTCACAGAAGCC
TTTTTAAGCTATTTGGGACTTGGTGTTCCGGCTCCGCTGGCAAGCTGGGGAACGATGGCTTCTGACGGATTGCCTGCATT
GACCTATTATCCGTGGCGTTTATTCTTCCCTGCCGGATTTATCTGCATTACAATGTTTGGTTTCAACGTTGTCGGCGACG
GATTAAGAGACGCATTGGATCCTAAGTTACGTAAATAA

Domains

Predicted by InterProScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (121-305)

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-79)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	35.599	100	0.361
amiD	Streptococcus thermophilus LMD-9	35.599	100	0.361