Detailed information NTG0189779

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: B9L64_RS06000
• Genome accession: NZ_CP020915
• Coordinates: 1175130..1176419 (+)
• Length: 429 a.a.
• NCBI ID: WP_046381234.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain 50-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1170130..1181419

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B9L64_RS05980	yrrB	1171501..1172121 (-)	621	WP_206697897.1	tetratricopeptide repeat protein	-
B9L64_RS05985	mnmA	1172207..1173322 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
B9L64_RS05990	iscSA	1173353..1174492 (-)	1140	WP_033882962.1	cysteine desulfurase family protein	-
B9L64_RS05995	cymR	1174511..1174927 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
B9L64_RS06000	rarA	1175130..1176419 (+)	1290	WP_046381234.1	replication-associated recombination protein A	Machinery gene
B9L64_RS06005	tcdA	1176442..1177206 (-)	765	WP_003229763.1	tRNA threonylcarbamoyladenosine dehydratase	-
B9L64_RS06015	aspS	1177542..1179320 (-)	1779	WP_015251570.1	aspartate--tRNA ligase	-
B9L64_RS06020	hisS	1179334..1180608 (-)	1275	WP_032722254.1	histidine--tRNA ligase	-
B9L64_RS06025	yrzK	1180990..1181160 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 429 a.a.
• Molecular weight: 47468.47 Da
• Isoelectric Point: 7.6407

>NTDB_id=189779 B9L64_RS06000 WP_046381234.1 1175130..1176419(+) (rarA) [Bacillus subtilis strain 50-1]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPELIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRKENKTKKQP

Nucleotide

• Length: 1290 bp

>NTDB_id=189779 B9L64_RS06000 WP_046381234.1 1175130..1176419(+) (rarA) [Bacillus subtilis strain 50-1]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGAACTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCAATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAGGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAAGAAAATAAAACAAAAAA
ACAGCCTTGA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	100	98.135	0.981