Detailed information NTG0188951

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: BBI11_RS07205
• Genome accession: NZ_CP016538
• Coordinates: 1435891..1438338 (+)
• Length: 815 a.a.
• NCBI ID: WP_068461898.1
• Uniprot ID: -
• Organism: Planococcus maritimus strain DSM 17275
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1430891..1443338

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BBI11_RS07180 (BBI11_08040)	-	1431071..1432354 (-)	1284	WP_068461889.1	replication-associated recombination protein A	-
BBI11_RS07185 (BBI11_08045)	cymR	1432492..1432908 (+)	417	WP_058380971.1	cysteine metabolism transcriptional regulator CymR	-
BBI11_RS07190 (BBI11_08050)	-	1432923..1434056 (+)	1134	WP_068461891.1	cysteine desulfurase family protein	-
BBI11_RS07195 (BBI11_08055)	mnmA	1434072..1435190 (+)	1119	WP_068461893.1	tRNA 2-thiouridine(34) synthase MnmA	-
BBI11_RS07200 (BBI11_08060)	-	1435205..1435864 (+)	660	WP_068461895.1	tetratricopeptide repeat protein	-
BBI11_RS07205 (BBI11_08065)	recD2	1435891..1438338 (+)	2448	WP_068461898.1	ATP-dependent RecD-like DNA helicase	Machinery gene
BBI11_RS07210 (BBI11_08070)	alaS	1438644..1441268 (+)	2625	WP_068461900.1	alanine--tRNA ligase	-
BBI11_RS07215 (BBI11_08075)	-	1441356..1441622 (+)	267	WP_058383651.1	IreB family regulatory phosphoprotein	-
BBI11_RS07220 (BBI11_08080)	ruvX	1441625..1442041 (+)	417	WP_068461903.1	Holliday junction resolvase RuvX	-
BBI11_RS07225 (BBI11_08085)	-	1442055..1442363 (+)	309	WP_058380964.1	DUF1292 domain-containing protein	-

Sequence

Protein

• Length: 815 a.a.
• Molecular weight: 90036.71 Da
• Isoelectric Point: 5.0677

>NTDB_id=188951 BBI11_RS07205 WP_068461898.1 1435891..1438338(+) (recD2) [Planococcus maritimus strain DSM 17275]
MSGQIDLFQKESEFVLGRPVVSIFHNPQNLFSIIKVKIQQTNTPYTEKEIIVSGYFPKLSLEEQYKFTGSVKNHPKYGVQ
FQAETFKKEVPETEQGVVHYLSSDLFNGIGRKTAETIVKKLGSDAIKKILEDPDALDGVPRLSDEKKDTIRSTLQMNLGL
ERVMIQLNDWGFGPQIGMRIYQAYREETIDILSKNPFQLIEEIEGIGFHRADELGSKLGITGSHPDRIKAAILHVLNQAS
LSEGHVFVDAKNLIPLVKQLLEASQSADIPIDSITQAAIELNEEGKVAGEETRLYLPSLYYSEVGIATKLETLIAEQETR
DGFPSSEIRKALGDAEERLGVNYAETQIDAIEKSLNSSVMILTGGPGTGKTTVVRGLVEVYAELHGLSLDPKEYGKKKEP
FPIILAAPTGRAAKRLSESTDLPAMTIHRLLGFNGQEKDEETEKEIEGKLIIIDEMSMVDTWLAHQLLKAVPVDAQLIFV
GDQDQLPPVGPGQVLRDMLASGRIPKVELTEIYRQSSGSSIIELAHQMKAGKLPDNIEAKTSDRSFIRAGADQISTVVEK
VVKSALSKGHTIKDIQVLAPMYKGPAGIDALNQMIQQMVNPNDDGSRKELAFGDITYRINDKVLQLVNQPESNVFNGDMG
EVVAIMKAKETVEKQDLLVVSFDGIEVTYQRSDLNQLTLAYCCSIHKAQGSEFPTVIMPVVRGYMKMLRRNLLYTGITRS
RDFLILCGDPGVFRYGVERTDDSSRLTTLADRLGIAEAPAATATTATENPAQTKTEQTISETQADEPKSLTQQNAHRIHP
MIGMEGITPRDFQGA

Nucleotide

• Length: 2448 bp

>NTDB_id=188951 BBI11_RS07205 WP_068461898.1 1435891..1438338(+) (recD2) [Planococcus maritimus strain DSM 17275]
ATGTCCGGACAGATTGATTTATTCCAAAAAGAAAGTGAATTTGTGCTGGGGCGTCCGGTCGTCTCGATTTTTCACAATCC
CCAAAACCTCTTCTCCATCATTAAAGTGAAAATCCAGCAAACCAACACCCCCTATACCGAAAAGGAAATTATCGTCTCCG
GTTATTTCCCGAAGCTATCGCTTGAAGAACAATACAAGTTTACCGGGAGCGTCAAAAACCATCCGAAATACGGCGTACAG
TTCCAGGCAGAAACCTTCAAGAAAGAAGTGCCTGAAACCGAACAAGGCGTTGTCCATTATTTATCGAGCGATTTGTTCAA
CGGCATCGGTCGCAAAACGGCTGAGACCATCGTCAAGAAACTCGGCAGCGACGCCATTAAAAAAATTCTAGAAGACCCGG
ATGCACTTGACGGTGTCCCGCGTCTTTCGGATGAAAAAAAAGATACCATCCGCTCGACTTTGCAGATGAATTTAGGACTT
GAGCGCGTCATGATCCAATTAAACGATTGGGGATTCGGCCCGCAAATCGGTATGAGAATATATCAAGCTTACCGTGAAGA
AACGATCGACATTCTTTCGAAAAACCCATTTCAGCTGATCGAGGAAATCGAAGGCATCGGCTTTCACCGTGCGGACGAAC
TCGGCTCAAAGCTTGGCATCACCGGCAGCCACCCCGATCGTATTAAAGCGGCCATTCTCCATGTGTTGAATCAGGCGTCG
CTATCGGAAGGGCATGTCTTTGTCGATGCGAAGAATTTAATCCCGCTCGTCAAGCAATTGCTTGAAGCGAGCCAATCAGC
GGACATTCCAATCGACTCGATTACACAAGCAGCTATCGAACTGAATGAGGAAGGCAAAGTGGCGGGGGAAGAAACCCGCC
TTTATTTGCCGTCATTGTATTATTCGGAAGTCGGCATCGCAACCAAGCTCGAGACCTTGATTGCCGAGCAGGAAACGCGC
GATGGCTTTCCATCTTCTGAAATCCGCAAAGCGCTTGGCGACGCTGAAGAGCGGCTTGGCGTCAATTATGCAGAGACGCA
AATCGATGCTATTGAAAAAAGTTTGAATTCCAGCGTCATGATTCTCACCGGCGGGCCAGGGACAGGCAAGACGACGGTCG
TTCGCGGCTTGGTCGAAGTCTATGCCGAACTGCATGGCTTGTCGCTTGATCCGAAAGAATATGGCAAGAAAAAAGAGCCA
TTCCCGATCATTTTGGCAGCTCCGACAGGGCGTGCGGCGAAACGGCTCAGCGAATCAACCGATTTGCCGGCGATGACGAT
TCACCGCTTGCTTGGCTTTAACGGCCAGGAAAAAGATGAAGAAACCGAAAAAGAAATTGAAGGCAAATTGATCATCATTG
ATGAAATGTCGATGGTCGACACTTGGCTTGCCCATCAATTATTAAAAGCGGTGCCTGTCGACGCCCAGCTGATTTTTGTT
GGCGACCAGGATCAATTGCCGCCAGTCGGCCCCGGACAAGTGCTGCGCGATATGCTTGCATCCGGCCGCATCCCGAAAGT
CGAGCTGACGGAAATTTACCGCCAAAGTTCGGGTTCGTCCATCATTGAACTCGCACACCAAATGAAAGCCGGGAAACTGC
CGGATAATATCGAAGCAAAAACCTCCGACCGTTCGTTCATCCGTGCCGGGGCAGACCAAATTTCGACAGTTGTTGAAAAA
GTCGTCAAGAGTGCTTTGTCAAAAGGCCATACGATCAAAGACATTCAAGTGCTTGCGCCAATGTATAAAGGGCCAGCAGG
CATCGATGCGCTTAACCAAATGATCCAGCAGATGGTCAACCCGAATGACGACGGTTCCCGCAAAGAGCTGGCATTTGGTG
ACATCACTTACCGTATCAACGACAAAGTGTTGCAGTTAGTGAACCAGCCTGAGAGCAATGTCTTTAACGGGGATATGGGC
GAAGTAGTCGCCATCATGAAAGCGAAAGAAACGGTGGAAAAGCAGGATTTGCTTGTCGTGTCATTTGACGGCATCGAAGT
AACGTACCAGCGCAGTGATTTAAACCAGCTGACGCTCGCTTATTGCTGTTCGATTCATAAAGCACAAGGCTCGGAATTCC
CGACAGTCATCATGCCGGTCGTCCGCGGTTATATGAAGATGCTGCGCCGCAATTTGCTCTACACCGGCATCACAAGAAGC
CGGGATTTCCTCATTCTTTGCGGCGACCCGGGCGTGTTCCGATATGGCGTCGAGCGTACAGACGATTCGAGCCGCTTGAC
GACGCTGGCAGATAGACTGGGAATCGCAGAGGCCCCAGCAGCAACAGCGACAACAGCGACAGAGAATCCGGCGCAAACAA
AAACCGAACAAACGATTTCCGAAACACAAGCCGACGAGCCAAAAAGCCTGACACAGCAAAATGCCCACCGCATCCATCCG
ATGATCGGCATGGAAGGCATCACGCCGCGCGACTTTCAAGGAGCGTGA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (343-550)

• Helix-hairpin-helix containing domain (HHH_RecD2) (159-247)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (591-652)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-727)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	54.523	99.018	0.54