Detailed information NTG0188532

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: AWQ24_RS02610
• Genome accession: NZ_CP016483
• Coordinates: 551019..552122 (+)
• Length: 367 a.a.
• NCBI ID: WP_062432248.1
• Uniprot ID: -
• Organism: Picosynechococcus sp. PCC 8807
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 546019..557122

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AWQ24_RS02580 (AWQ24_02580)	-	546153..546503 (+)	351	WP_065710084.1	DUF4870 domain-containing protein	-
AWQ24_RS02585 (AWQ24_02585)	-	546723..547523 (+)	801	WP_065715925.1	response regulator transcription factor	-
AWQ24_RS02590 (AWQ24_02590)	-	547531..548262 (-)	732	WP_065715926.1	ATP-binding cassette domain-containing protein	-
AWQ24_RS02595 (AWQ24_02595)	-	548294..548968 (-)	675	WP_065715927.1	RibD family protein	-
AWQ24_RS02600 (AWQ24_02600)	-	548961..549404 (-)	444	WP_065717279.1	DUF3531 family protein	-
AWQ24_RS02605 (AWQ24_02605)	-	549526..550806 (-)	1281	WP_065715928.1	ABC transporter substrate-binding protein	-
AWQ24_RS02610 (AWQ24_02610)	pilM	551019..552122 (+)	1104	WP_062432248.1	type IV pilus assembly protein PilM	Machinery gene
AWQ24_RS02615 (AWQ24_02615)	-	552127..552858 (+)	732	WP_062432249.1	PilN domain-containing protein	-
AWQ24_RS02620 (AWQ24_02620)	-	552909..553715 (+)	807	WP_030007112.1	hypothetical protein	-
AWQ24_RS02625 (AWQ24_02625)	-	553948..556332 (+)	2385	WP_065715929.1	AMIN domain-containing protein	-
AWQ24_RS02630 (AWQ24_02630)	-	556412..556996 (+)	585	WP_062432257.1	transposase	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 40615.69 Da
• Isoelectric Point: 4.2653

>NTDB_id=188532 AWQ24_RS02610 WP_062432248.1 551019..552122(+) (pilM) [Picosynechococcus sp. PCC 8807]
MLDFFKNIFKPKRKGIGIEISTERLNIVQLKKQGQVYKLATYITEPVPEGIFEEGKIVDVPALAELIQNTLSANNISAKQ
VTAAVPMREAIIRLIPIPAELDDAELRDMVLNHEASLYLPYPREEVDLDYQKLGFFQDEDGIEKVQVLLVATRREVTDAY
VETIVQAGLEINILEINSFALLRTIREQLRQFSSQEAVVLVDIEFDCTEIAIVVDGVPQFSRTVPIGASQLQNALSRAMN
LPAPRDIELLQGMTIPNTPMEGSRTGATGINPGMAALLRVLGELTDELRRSIDFYLNQSGELEVAQLMLAGPGGGISQLD
EFFTQRLSIPTIQIDPFEALSIDVDEEISKVQRPSLGTALGLGLREV

Nucleotide

• Length: 1104 bp

>NTDB_id=188532 AWQ24_RS02610 WP_062432248.1 551019..552122(+) (pilM) [Picosynechococcus sp. PCC 8807]
ATGCTAGATTTCTTCAAAAATATCTTCAAACCAAAGCGTAAAGGGATTGGCATCGAGATCTCAACGGAACGCTTAAACAT
TGTCCAACTCAAAAAACAGGGACAGGTCTATAAGCTGGCGACCTACATCACCGAACCCGTCCCCGAAGGCATTTTTGAAG
AAGGAAAAATTGTTGATGTTCCCGCCCTCGCCGAGCTGATCCAAAATACCCTCAGCGCCAACAACATCAGCGCCAAACAG
GTTACGGCCGCCGTGCCCATGCGGGAGGCAATTATCCGCCTGATCCCGATCCCCGCCGAACTCGATGATGCCGAACTGCG
GGATATGGTCCTCAACCACGAAGCAAGCCTCTACCTGCCCTACCCCCGCGAAGAAGTGGATCTCGATTACCAAAAACTTG
GGTTTTTCCAAGATGAAGATGGCATTGAAAAGGTGCAAGTTCTGTTGGTGGCCACCCGGCGAGAAGTGACCGACGCCTAT
GTGGAGACCATTGTCCAGGCGGGACTAGAGATCAATATCCTCGAAATCAATAGTTTTGCCCTCCTCCGGACGATTCGTGA
GCAACTACGGCAGTTTAGCTCCCAGGAAGCGGTGGTCTTGGTTGATATTGAATTTGACTGTACAGAAATTGCCATTGTGG
TCGATGGGGTGCCGCAGTTTTCCCGGACAGTACCCATCGGCGCTTCGCAACTACAAAATGCCCTATCCCGCGCCATGAAT
TTACCTGCCCCCCGCGACATCGAACTTCTCCAGGGGATGACCATTCCCAACACACCAATGGAAGGATCGCGCACCGGCGC
CACGGGCATTAACCCTGGGATGGCGGCCCTCCTGCGCGTTCTGGGGGAACTGACAGACGAATTGCGCCGTTCCATTGATT
TTTATCTCAACCAGAGTGGTGAGCTGGAAGTGGCCCAATTGATGCTGGCTGGCCCTGGTGGTGGGATTAGTCAACTGGAT
GAATTTTTTACGCAGCGTCTCAGCATTCCGACGATTCAAATTGATCCGTTTGAGGCGCTGTCTATTGACGTTGATGAAGA
AATTTCCAAGGTGCAACGGCCATCCTTGGGCACTGCATTGGGTTTAGGACTCCGGGAGGTATAG

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (283-366)

• Type IV pilus assembly protein PilM; (PilM_2) (17-241)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Synechocystis sp. PCC 6803	71.585	99.728	0.714