Detailed information NTG0188515

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: AWQ22_RS02585
• Genome accession: NZ_CP016477
• Coordinates: 546838..547941 (+)
• Length: 367 a.a.
• NCBI ID: WP_062432248.1
• Uniprot ID: -
• Organism: Picosynechococcus sp. PCC 7117
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 541838..552941

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AWQ22_RS02555 (AWQ22_02555)	-	541975..542325 (+)	351	WP_065710084.1	DUF4870 domain-containing protein	-
AWQ22_RS02560 (AWQ22_02560)	-	542545..543345 (+)	801	WP_065710085.1	response regulator transcription factor	-
AWQ22_RS02565 (AWQ22_02565)	-	543353..544084 (-)	732	WP_065710086.1	ATP-binding cassette domain-containing protein	-
AWQ22_RS02570 (AWQ22_02570)	-	544114..544788 (-)	675	WP_065710087.1	RibD family protein	-
AWQ22_RS02575 (AWQ22_02575)	-	544781..545224 (-)	444	WP_030007109.1	DUF3531 family protein	-
AWQ22_RS02580 (AWQ22_02580)	-	545345..546625 (-)	1281	WP_065710088.1	ABC transporter substrate-binding protein	-
AWQ22_RS02585 (AWQ22_02585)	pilM	546838..547941 (+)	1104	WP_062432248.1	type IV pilus assembly protein PilM	Machinery gene
AWQ22_RS02590 (AWQ22_02590)	-	547946..548677 (+)	732	WP_065710089.1	PilN domain-containing protein	-
AWQ22_RS02595 (AWQ22_02595)	-	548728..549534 (+)	807	WP_030007112.1	hypothetical protein	-
AWQ22_RS17315 (AWQ22_02600)	-	549767..552160 (+)	2394	WP_065710090.1	AMIN domain-containing protein	-
AWQ22_RS02605 (AWQ22_02605)	-	552240..552824 (+)	585	WP_065710091.1	transposase	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 40615.69 Da
• Isoelectric Point: 4.2653

>NTDB_id=188515 AWQ22_RS02585 WP_062432248.1 546838..547941(+) (pilM) [Picosynechococcus sp. PCC 7117]
MLDFFKNIFKPKRKGIGIEISTERLNIVQLKKQGQVYKLATYITEPVPEGIFEEGKIVDVPALAELIQNTLSANNISAKQ
VTAAVPMREAIIRLIPIPAELDDAELRDMVLNHEASLYLPYPREEVDLDYQKLGFFQDEDGIEKVQVLLVATRREVTDAY
VETIVQAGLEINILEINSFALLRTIREQLRQFSSQEAVVLVDIEFDCTEIAIVVDGVPQFSRTVPIGASQLQNALSRAMN
LPAPRDIELLQGMTIPNTPMEGSRTGATGINPGMAALLRVLGELTDELRRSIDFYLNQSGELEVAQLMLAGPGGGISQLD
EFFTQRLSIPTIQIDPFEALSIDVDEEISKVQRPSLGTALGLGLREV

Nucleotide

• Length: 1104 bp

>NTDB_id=188515 AWQ22_RS02585 WP_062432248.1 546838..547941(+) (pilM) [Picosynechococcus sp. PCC 7117]
ATGCTAGATTTCTTCAAAAATATCTTCAAACCAAAGCGTAAAGGGATTGGCATCGAGATCTCAACGGAACGCTTAAACAT
TGTCCAACTCAAAAAACAGGGACAGGTCTATAAGCTGGCGACCTACATCACCGAACCCGTACCCGAAGGCATTTTTGAAG
AAGGAAAAATTGTTGATGTTCCCGCCCTCGCCGAGCTGATCCAAAATACCCTCAGCGCCAACAACATCAGCGCTAAACAG
GTTACCGCCGCCGTGCCCATGCGGGAGGCAATTATTCGCCTGATCCCGATCCCCGCCGAACTCGATGATGCCGAACTGCG
GGATATGGTCCTCAACCACGAAGCAAGCCTCTACCTGCCCTACCCGCGCGAAGAAGTGGATCTCGATTATCAAAAACTTG
GGTTTTTCCAGGATGAAGATGGCATTGAAAAGGTGCAAGTTCTGTTGGTGGCCACCCGGCGAGAAGTGACCGACGCCTAT
GTGGAGACCATTGTCCAGGCGGGACTAGAGATCAATATCCTCGAAATCAATAGTTTTGCCCTCCTCCGGACGATTCGTGA
GCAACTACGGCAGTTTAGCTCCCAGGAAGCGGTGGTCTTGGTTGATATTGAATTTGACTGTACCGAAATTGCCATTGTGG
TCGATGGGGTACCACAGTTTTCCCGGACGGTGCCTATTGGTGCTTCGCAACTGCAAAATGCCCTATCCCGCGCCATGAAT
TTACCTGCCCCCCGCGACATCGAACTTCTCCAGGGGATGACCATTCCCAACACACCAATGGAAGGATCGCGCACTGGCGC
CACGGGCATTAACCCTGGGATGGCGGCCCTCCTGCGCGTTCTAGGGGAACTGACAGACGAATTGCGCCGTTCCATTGATT
TTTACCTCAACCAGAGCGGTGAGCTGGAAGTGGCCCAATTAATGTTGGCTGGCCCTGGGGGGGGGATTAGTCAACTGGAT
GAATTTTTTACGCAGCGTCTCAGCATTCCGACGATTCAAATTGATCCGTTTGAGGCGCTGTCTATTGACGTTGATGAAGA
AATTTCCAAGGTACAACGACCGTCCTTGGGCACTGCACTGGGTTTAGGACTCCGGGAGGTATAG

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (283-366)

• Type IV pilus assembly protein PilM; (PilM_2) (17-241)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Synechocystis sp. PCC 6803	71.585	99.728	0.714