Detailed information NTG0187865

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: BBD27_RS08545
• Genome accession: NZ_CP016394
• Coordinates: 1623278..1624159 (+)
• Length: 293 a.a.
• NCBI ID: WP_011681210.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain ND07
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1618278..1629159

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BBD27_RS08520 (BBD27_1692)	-	1619798..1620232 (+)	435	WP_231107205.1	DUF4832 domain-containing protein	-
BBD27_RS08525 (BBD27_1693)	galE	1620247..1621260 (+)	1014	WP_014621668.1	UDP-glucose 4-epimerase GalE	-
BBD27_RS08530 (BBD27_1694)	-	1621449..1621685 (+)	237	WP_002946959.1	DUF1146 family protein	-
BBD27_RS08535 (BBD27_1695)	murA	1621755..1623026 (+)	1272	WP_024704149.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
BBD27_RS08540 (BBD27_1696)	-	1623028..1623216 (+)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
BBD27_RS08545 (BBD27_1697)	endA	1623278..1624159 (+)	882	WP_011681210.1	DNA/RNA non-specific endonuclease	Machinery gene
BBD27_RS08550 (BBD27_1698)	-	1624231..1624881 (-)	651	WP_024704148.1	amino acid ABC transporter permease	-
BBD27_RS08555 (BBD27_1699)	-	1624893..1625591 (-)	699	WP_011681209.1	amino acid ABC transporter permease	-
BBD27_RS08560 (BBD27_1700)	-	1625609..1626442 (-)	834	WP_011681208.1	transporter substrate-binding domain-containing protein	-
BBD27_RS08565 (BBD27_1701)	-	1626454..1627221 (-)	768	WP_011681207.1	amino acid ABC transporter ATP-binding protein	-
BBD27_RS08570 (BBD27_1702)	vicR	1627748..1628455 (+)	708	WP_011681206.1	response regulator YycF	Regulator

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31773.50 Da
• Isoelectric Point: 10.1789

>NTDB_id=187865 BBD27_RS08545 WP_011681210.1 1623278..1624159(+) (endA) [Streptococcus thermophilus strain ND07]
MAKRKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSTNSQSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=187865 BBD27_RS08545 WP_011681210.1 1623278..1624159(+) (endA) [Streptococcus thermophilus strain ND07]
ATGGCAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTGATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTGGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGATGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	72.803	81.57	0.594
endA	Streptococcus pneumoniae D39	72.803	81.57	0.594
endA	Streptococcus pneumoniae R6	72.803	81.57	0.594
endA	Streptococcus pneumoniae TIGR4	72.803	81.57	0.594