Detailed information NTG0186837

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: B4V05_RS03470
• Genome accession: NZ_CP020459
• Coordinates: 672741..675158 (+)
• Length: 805 a.a.
• NCBI ID: WP_076632159.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain FAM18311
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 667741..680158

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B4V05_RS03440 (B4V05_03430)	recN	668055..669758 (+)	1704	WP_056948329.1	DNA repair protein RecN	Machinery gene
B4V05_RS03445 (B4V05_03435)	-	669817..670161 (-)	345	WP_237024081.1	hypothetical protein	-
B4V05_RS03450 (B4V05_03440)	-	670263..670487 (+)	225	WP_076632161.1	YdbC family protein	-
B4V05_RS03455 (B4V05_03445)	gmk	670560..671171 (+)	612	WP_076632160.1	guanylate kinase	-
B4V05_RS03460 (B4V05_03450)	rpoZ	671176..671433 (+)	258	WP_011374395.1	DNA-directed RNA polymerase subunit omega	-
B4V05_RS03465 (B4V05_03455)	coaBC	671522..672739 (+)	1218	WP_011374396.1	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	-
B4V05_RS03470 (B4V05_03460)	priA	672741..675158 (+)	2418	WP_076632159.1	primosomal protein N'	Machinery gene
B4V05_RS03475 (B4V05_03465)	fmt	675178..676134 (+)	957	WP_076632158.1	methionyl-tRNA formyltransferase	-
B4V05_RS03480 (B4V05_03470)	rsmB	676124..677467 (+)	1344	WP_076632157.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
B4V05_RS03485 (B4V05_03475)	-	677489..678235 (+)	747	WP_025015868.1	Stp1/IreP family PP2C-type Ser/Thr phosphatase	-
B4V05_RS03490 (B4V05_03480)	pknB	678232..680115 (+)	1884	WP_011374401.1	Stk1 family PASTA domain-containing Ser/Thr kinase	Regulator

Sequence

Protein

• Length: 805 a.a.
• Molecular weight: 90631.12 Da
• Isoelectric Point: 7.6833

>NTDB_id=186837 B4V05_RS03470 WP_076632159.1 672741..675158(+) (priA) [Latilactobacillus sakei strain FAM18311]
MPQIAKVIVDVPTMQTNRPYDYQVPVTLVDVIQPGMRVIIPFGNGDRKIQGFVLQVLDQPSFTGQLKAIEAVVDLTPAVN
PELLSLSDWLAQQTYAFQITCLQTMLPSVMRAKYTKTATLTDEIPTDLQASLFNGNDELTFDQNLVPDKLKQLMQLQRQG
KISVTYHVDNRAQVKQLTAIEPALSFEQLEEARMGLRKSAQKQSQLISYLQTLIDQEAPTLLKTILEKTTFTRENIRIGA
EKGWLRQVKVEAYRNPYANAVQPTHKMTLTSEQETAVDAVVQSASTDASEVFLIEGVTGSGKTEVYLQTIDAVLQQGKTA
LMLVPEIALTPQMVQRVKGRFGDLVAVLHSGLSEGEKYDEWRRIERKEARVVVGARSAVFAPLEDIGVIIMDEEHEASYK
QDESPRYHARDVAIWRSQYHNCPVILGSATPSLESRARAQKDVYHLIRLTQRVNQQALPAVELVDMREAMRVQKASNFSP
ALLAGIKERMQKGEQSVLLLNRRGFSSFIMCRDCGFVLQCPNCDISLTLHMDTHSMKCHYCGHEEAIPKICPSCQSRQIR
YFGTGTQKVEAELQELIPEARILRMDVDTTRKKGAHAKLLKKFGDHEADILLGTQMIAKGLDFPDVTLVGVINADTALGL
PDFRASERTFQLLTQVSGRAGRADKVGQVIVQSYNPENYAIQFAKQHDYEGFYQYEMAVRHRGGYPPYYFTVKVTVSHPE
EALAAKKSFQIAKQMRPILSDQALILGPTPKSIARINNRYFYQIVIKYKQEPQLQAKLAEILETTQIDTRHGFKIGLDNE
PLQFT

Nucleotide

• Length: 2418 bp

>NTDB_id=186837 B4V05_RS03470 WP_076632159.1 672741..675158(+) (priA) [Latilactobacillus sakei strain FAM18311]
ATGCCACAGATTGCTAAAGTAATCGTTGATGTGCCGACAATGCAAACTAATCGGCCATATGATTATCAGGTACCGGTCAC
TTTAGTTGATGTCATTCAACCTGGGATGCGGGTTATTATTCCGTTTGGAAATGGCGATCGTAAGATTCAGGGCTTTGTCT
TGCAAGTTTTAGACCAGCCAAGCTTTACGGGCCAATTAAAGGCAATCGAGGCAGTTGTTGATTTAACGCCAGCGGTTAAC
CCTGAATTACTATCACTTTCGGATTGGTTAGCACAACAGACGTATGCTTTTCAGATCACGTGTCTGCAGACGATGTTACC
CAGTGTGATGCGGGCTAAATATACGAAAACTGCGACGTTAACTGATGAAATTCCAACGGACTTACAGGCCAGTCTGTTCA
ATGGCAATGATGAGTTGACTTTTGATCAGAATCTGGTGCCTGATAAGTTAAAACAACTCATGCAATTGCAACGCCAAGGT
AAAATTAGCGTCACTTATCACGTTGACAACCGGGCACAAGTTAAGCAATTAACGGCGATTGAGCCCGCACTGAGTTTTGA
ACAATTGGAAGAAGCACGGATGGGTTTACGAAAGTCAGCCCAGAAGCAAAGCCAATTAATCAGTTATCTGCAAACGCTGA
TTGATCAAGAGGCACCGACTTTATTAAAAACGATTTTAGAAAAAACAACTTTTACGCGGGAAAATATTCGAATCGGTGCG
GAAAAAGGCTGGTTACGCCAAGTTAAGGTGGAAGCTTACCGGAATCCGTACGCTAATGCTGTTCAACCAACCCACAAAAT
GACGCTAACGAGCGAACAAGAAACCGCAGTTGATGCGGTCGTTCAATCCGCATCAACGGATGCCTCAGAAGTATTCTTAA
TTGAAGGTGTCACTGGCAGTGGGAAGACCGAAGTTTATTTACAAACAATTGATGCCGTCTTGCAACAAGGGAAGACCGCA
CTGATGTTAGTTCCTGAAATTGCCTTGACGCCGCAGATGGTGCAACGCGTGAAGGGCCGCTTTGGTGATTTAGTCGCTGT
GTTACATAGTGGCTTGTCTGAAGGCGAAAAATACGACGAATGGCGGCGCATAGAACGCAAAGAAGCGCGCGTGGTCGTCG
GTGCCCGCTCAGCCGTTTTTGCGCCACTTGAAGATATCGGCGTGATTATTATGGACGAAGAACATGAAGCCAGTTATAAG
CAAGACGAAAGTCCCCGTTATCATGCACGCGACGTTGCGATTTGGCGGAGTCAGTATCATAACTGCCCGGTCATTTTAGG
TAGCGCCACACCATCGTTAGAATCCCGGGCTCGGGCGCAAAAAGATGTCTACCATCTGATTCGCCTGACGCAACGGGTGA
ACCAACAAGCCTTACCAGCTGTTGAACTAGTTGATATGCGCGAAGCGATGAGGGTTCAAAAAGCCAGCAACTTTTCACCG
GCGTTATTAGCCGGCATCAAAGAACGGATGCAAAAGGGCGAACAAAGTGTGTTACTCCTAAATCGTCGCGGTTTTTCATC
ATTTATCATGTGTCGGGATTGCGGGTTTGTCTTGCAGTGTCCCAACTGTGATATTTCGTTGACGTTACACATGGATACGC
ATTCGATGAAATGCCATTATTGTGGGCACGAAGAAGCCATTCCTAAGATTTGCCCCAGCTGTCAGAGTCGTCAAATTCGC
TATTTTGGGACTGGCACGCAAAAAGTCGAAGCTGAATTACAAGAATTAATCCCTGAAGCACGGATCTTGCGGATGGACGT
TGATACGACTCGGAAAAAAGGCGCGCATGCTAAATTATTGAAAAAATTTGGTGATCACGAAGCTGATATCTTATTAGGGA
CGCAGATGATTGCCAAGGGCCTAGATTTCCCAGATGTAACGTTAGTCGGGGTGATCAACGCTGATACTGCTTTGGGTTTA
CCGGATTTTCGGGCGAGTGAGCGGACTTTCCAATTATTAACGCAGGTTAGTGGTCGTGCGGGTCGTGCAGATAAGGTGGG
GCAAGTGATTGTTCAATCTTATAATCCCGAGAATTACGCGATTCAATTTGCCAAGCAGCACGATTATGAAGGCTTTTATC
AATATGAAATGGCGGTGCGCCACCGTGGCGGCTATCCGCCTTATTACTTTACGGTGAAGGTGACGGTTAGCCACCCTGAA
GAAGCACTTGCCGCAAAGAAGAGTTTTCAAATTGCCAAACAGATGCGACCGATTTTATCCGACCAAGCACTGATTCTCGG
GCCCACCCCGAAATCAATTGCTCGGATTAATAATCGTTATTTTTACCAAATTGTGATTAAATATAAACAGGAACCACAAC
TTCAGGCTAAATTAGCCGAAATACTAGAGACCACCCAAATCGATACTCGTCACGGGTTTAAGATTGGGCTGGATAATGAA
CCTCTACAATTTACTTAA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (561-663)

• Type III restriction enzyme, res subunit (ResIII) (266-432)

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (520-545)

• Primosomal protein N C-terminal domain (PriA_C) (707-801)

• 3DNA-binding domain (3BD) (PriA_3primeBD) (6-107)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Bacillus subtilis subsp. subtilis str. 168	51.911	100	0.523