Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   A6J87_RS09590 Genome accession   NZ_CP020451
Coordinates   1990591..1992339 (+) Length   582 a.a.
NCBI ID   WP_080611977.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_259     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1985591..1997339
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J87_RS09570 (A6J87_09510) glyA 1985984..1987234 (+) 1251 WP_080611975.1 serine hydroxymethyltransferase -
  A6J87_RS09575 (A6J87_09515) - 1987240..1988217 (+) 978 WP_003093572.1 nucleoid-associated protein -
  A6J87_RS09580 (A6J87_09520) - 1988219..1988830 (+) 612 WP_037597899.1 lysozyme family protein -
  A6J87_RS09585 (A6J87_09525) - 1988862..1990601 (+) 1740 WP_080611976.1 ABC transporter ATP-binding protein -
  A6J87_RS09590 (A6J87_09530) rcrQ 1990591..1992339 (+) 1749 WP_080611977.1 ABC transporter ATP-binding protein Regulator
  A6J87_RS09595 (A6J87_09535) - 1992517..1992648 (+) 132 WP_002885174.1 teichoic acid D-Ala incorporation-associated protein DltX -
  A6J87_RS09600 (A6J87_09540) dltA 1992657..1994207 (+) 1551 WP_080611978.1 D-alanine--poly(phosphoribitol) ligase subunit DltA -
  A6J87_RS09605 (A6J87_09545) dltB 1994204..1995451 (+) 1248 WP_045768621.1 D-alanyl-lipoteichoic acid biosynthesis protein DltB -
  A6J87_RS09610 (A6J87_09550) dltC 1995469..1995708 (+) 240 WP_002891149.1 D-alanine--poly(phosphoribitol) ligase subunit DltC -
  A6J87_RS09615 (A6J87_09555) dltD 1995701..1996969 (+) 1269 WP_064521196.1 D-alanyl-lipoteichoic acid biosynthesis protein DltD -

Sequence

Protein


Download         Length: 582 a.a.        Molecular weight: 65395.82 Da        Isoelectric Point: 6.8540

>NTDB_id=186800 A6J87_RS09590 WP_080611977.1 1990591..1992339(+) (rcrQ) [Streptococcus salivarius strain FDAARGOS_259]
MKARNNKSTLKRLSRDILSQRYLFALATIGTIVQVALTVYLPILIGDAVDAVLKMNAVLLMSRLIWQMLVVVIANSAIQW
LNPLIYNRLIYSYSESLRERVMLKIHAMPLSYLDRQGTGDMVSRVTTDSDQLNNGLLMVFNQFFVGLLTIFVIIITMARL
DWFMMLLVLVMTPLSMLVARFIAKKSYQLYRNQTKWRGMQTQLIEESLTQEALVQSLNAQDQMVRNFKDVNGKYADYSQG
AIFYSSAVNPATRFVNSLIYALIAGVGAYRIMSGGAFTVGQLTTFLNYVTQYTKPFNDISSVLSELQSALACADRLYMIL
DEDEIPETGNVVLEEADLQGHFKFDHVQFGYLPNKPLIRDLSIDIPAASTVAIVGPTGAGKSTLINLLMRFYDLDKGQIL
LDGRPITDYTRESLRKQIGMVLQETWLEVGTIHDNIAYGNPEASREEVIAAAKAANADFFIQQLPQGYDTYLNDAGQSLS
QGQRQLLTIARIFVSVPKILILDEATSSIDTRTELLIQEAFAKLMKGRTSFIIAHRLSTIENADLILVMNNGDIVEHGTH
EQLMQAKGMYYRMQTAQKTQNS

Nucleotide


Download         Length: 1749 bp        

>NTDB_id=186800 A6J87_RS09590 WP_080611977.1 1990591..1992339(+) (rcrQ) [Streptococcus salivarius strain FDAARGOS_259]
ATGAAGGCTAGAAATAATAAATCAACGCTTAAACGTTTAAGCAGAGATATCTTAAGCCAGCGTTACCTCTTTGCCTTAGC
AACTATTGGGACCATTGTTCAAGTTGCCTTAACGGTTTACTTACCTATCTTAATTGGTGATGCAGTTGATGCTGTTCTTA
AGATGAATGCCGTTCTTTTGATGTCACGTTTAATATGGCAGATGCTTGTAGTTGTCATAGCCAATAGTGCGATTCAGTGG
CTAAATCCTTTAATTTATAACCGTTTGATTTATTCTTATAGTGAAAGTTTACGTGAGAGAGTCATGCTGAAAATTCATGC
CATGCCTCTCAGTTACCTTGACCGTCAAGGAACTGGAGATATGGTTAGCCGTGTGACTACAGATAGTGACCAATTAAATA
ACGGACTTCTCATGGTCTTTAACCAATTTTTCGTCGGGCTTTTGACTATATTTGTTATTATCATTACCATGGCTCGTTTG
GACTGGTTCATGATGCTCTTAGTTCTAGTGATGACACCCCTGTCAATGCTTGTGGCACGTTTTATCGCCAAGAAGAGCTA
TCAACTCTATCGCAATCAAACCAAATGGCGAGGCATGCAGACTCAGTTGATTGAGGAAAGTTTGACTCAAGAAGCCTTAG
TACAGAGTTTAAATGCTCAAGACCAGATGGTTAGGAATTTTAAAGACGTCAATGGTAAGTATGCTGATTATTCACAGGGA
GCCATCTTTTATTCGTCAGCGGTTAACCCAGCTACACGCTTTGTTAATAGTCTGATTTATGCTCTCATTGCAGGTGTTGG
AGCCTATCGTATCATGTCAGGTGGCGCATTTACAGTGGGACAATTGACTACCTTCCTAAACTATGTCACTCAGTATACGA
AGCCTTTCAATGACATTTCGTCTGTTCTTTCAGAACTTCAAAGTGCTTTGGCTTGTGCCGACCGCCTTTATATGATTTTA
GATGAAGATGAAATACCAGAAACAGGCAATGTGGTTTTGGAAGAAGCAGATTTGCAAGGACATTTTAAATTTGACCATGT
TCAATTTGGTTATTTGCCTAATAAACCTCTTATCAGGGATTTGAGCATTGATATACCTGCGGCAAGTACTGTTGCCATTG
TTGGCCCTACAGGAGCAGGCAAATCTACCCTCATTAACCTGCTCATGCGTTTCTATGATTTGGACAAGGGTCAAATTTTA
CTAGACGGTAGACCTATTACAGATTATACCCGTGAGAGTCTTCGCAAGCAGATTGGGATGGTTCTACAGGAAACTTGGCT
TGAGGTCGGCACTATTCATGATAATATTGCCTATGGAAATCCAGAAGCCAGTCGTGAAGAAGTCATAGCAGCGGCCAAAG
CTGCCAATGCAGATTTCTTTATTCAGCAGTTGCCTCAAGGCTATGACACCTACTTGAATGATGCGGGGCAATCCCTTTCT
CAGGGGCAACGTCAGCTTTTGACCATTGCTCGCATATTTGTCAGTGTGCCTAAAATCTTAATCTTAGATGAAGCCACTTC
TAGTATCGATACCCGTACAGAGCTTCTCATTCAAGAGGCTTTCGCTAAATTAATGAAAGGTCGAACAAGTTTCATCATTG
CCCATCGATTGTCTACCATCGAAAATGCGGACCTTATTTTGGTCATGAATAATGGGGATATCGTTGAACACGGAACCCAT
GAACAACTGATGCAAGCTAAGGGAATGTACTATCGTATGCAGACGGCCCAAAAGACACAAAATAGTTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(25-295)

ABC transporter (ABC_tran)

(359-507)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

38.567

100

0.388