Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   A6J87_RS08330 Genome accession   NZ_CP020451
Coordinates   1630562..1632430 (+) Length   622 a.a.
NCBI ID   WP_070576905.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_259     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1625562..1637430
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J87_RS08320 (A6J87_08290) gshAB 1625865..1628129 (-) 2265 WP_080611885.1 bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB -
  A6J87_RS08325 (A6J87_08295) - 1628827..1630572 (+) 1746 WP_070576902.1 ABC transporter ATP-binding protein -
  A6J87_RS08330 (A6J87_08300) rcrQ 1630562..1632430 (+) 1869 WP_070576905.1 ABC transporter ATP-binding protein Regulator
  A6J87_RS08335 (A6J87_08305) - 1632526..1634049 (-) 1524 WP_070576908.1 ATP-binding cassette domain-containing protein -
  A6J87_RS08340 (A6J87_08310) - 1634483..1635571 (+) 1089 WP_014634794.1 hypothetical protein -

Sequence

Protein


Download         Length: 622 a.a.        Molecular weight: 68600.02 Da        Isoelectric Point: 5.2443

>NTDB_id=186796 A6J87_RS08330 WP_070576905.1 1630562..1632430(+) (rcrQ) [Streptococcus salivarius strain FDAARGOS_259]
MQNKKKANWGSLARLLRFLWQDYKLSLSIAFVLIVVASLATVNLTASIQSLVDVYVQPMLKSGSHDFGPLLRFLTSVGVF
CLIGVVANYVASLLMATISQDSLRSLRNQLFARMQKLSVRYFDTHQHGDIMSIYTNDIDALRQAVEQSIPQLLQTAITLI
GVTVTMLTVSPLLFIVVLVMVGIMFMVIKNVSAKSGRYFGEQQKNLGIENGFIEEMMSGQKVVKAFVHEEESMADFDKIN
EQLFESSYLANRYANVLMPILGNLGNVSFVLTALVGGLFALNGVGGLTIGGLMAFLQLNRSFNGPITQVSQQLNFVLMAL
AGADRIFDLLDEAEEVDQGKVTLVNYELVDGKMVVTDKKTNLWAWKHPRPNGDYELVELVGNVVFQDVDFSYDGKKQILH
GVNLYADKGQKVAFVGATGAGKTTITNLINRFYDIQSGVITYDGIDVKLIEKASLRRSLGIVLQDTHLFTGTIAENIAYG
RSDATREEILEAARIANVDSFVQHLDNGYDTVLTDDGAGLSNGQRQLIAIARAALANAPVLILDEATSSIDSRTEKMVQE
GMDRLMEGRTVFVIAHRLSTIVNSDVIMVMDHGRIIERGDHDSLMEQGGTYYRLYTGGLEID

Nucleotide


Download         Length: 1869 bp        

>NTDB_id=186796 A6J87_RS08330 WP_070576905.1 1630562..1632430(+) (rcrQ) [Streptococcus salivarius strain FDAARGOS_259]
ATGCAGAATAAGAAAAAAGCTAATTGGGGCTCTCTAGCACGTCTTCTACGCTTTTTGTGGCAAGACTACAAACTTTCACT
TAGTATTGCCTTTGTCCTCATTGTTGTTGCTTCTTTGGCAACGGTTAATTTGACGGCTTCGATTCAGTCCTTGGTGGACG
TTTACGTTCAACCCATGCTCAAATCTGGTAGTCATGATTTTGGGCCACTGTTACGTTTCTTGACGTCAGTTGGGGTCTTT
TGTCTTATCGGTGTGGTTGCCAACTATGTGGCCTCCCTCCTCATGGCGACGATTTCACAAGATTCCCTGCGTTCCCTTCG
TAATCAGCTTTTTGCTCGTATGCAAAAGCTTTCGGTTCGCTACTTTGACACTCACCAACACGGGGACATCATGTCTATCT
ATACCAATGACATCGATGCCCTTCGTCAGGCTGTTGAGCAGTCTATTCCGCAGTTGTTACAAACGGCCATTACCCTTATC
GGGGTGACTGTAACCATGCTTACGGTTAGTCCCCTTCTCTTTATCGTGGTCCTAGTCATGGTAGGCATCATGTTTATGGT
CATCAAAAATGTATCAGCTAAATCAGGTCGTTACTTCGGTGAACAACAAAAGAACCTAGGGATTGAGAATGGTTTTATCG
AAGAAATGATGTCAGGGCAAAAGGTCGTCAAGGCCTTCGTCCACGAAGAAGAAAGCATGGCTGACTTCGACAAGATTAAT
GAACAACTCTTTGAATCTTCTTACTTGGCCAACCGCTATGCCAATGTTCTCATGCCAATTCTTGGGAACTTAGGAAATGT
TTCCTTTGTTTTGACTGCCCTGGTTGGTGGACTCTTCGCTCTAAATGGTGTCGGTGGTTTGACTATCGGTGGTCTCATGG
CCTTCCTACAATTGAACCGTTCCTTCAACGGCCCAATTACTCAGGTTTCTCAACAACTTAACTTTGTCCTTATGGCCCTT
GCTGGTGCTGATCGTATCTTTGACCTTTTGGATGAAGCAGAAGAAGTTGACCAAGGTAAGGTCACTTTGGTTAACTACGA
ATTGGTAGATGGGAAAATGGTTGTGACAGACAAGAAAACCAATCTCTGGGCTTGGAAACACCCACGTCCAAATGGTGACT
ACGAATTGGTTGAGTTGGTCGGAAATGTGGTCTTCCAAGATGTTGATTTCTCTTACGATGGTAAGAAACAAATCCTTCAT
GGCGTTAACCTCTATGCGGATAAGGGGCAAAAGGTTGCCTTTGTCGGTGCGACAGGTGCTGGTAAGACGACAATTACCAA
CTTGATTAACCGTTTTTACGATATCCAATCTGGTGTGATTACTTATGATGGTATCGATGTGAAGCTGATTGAAAAAGCTT
CTCTTCGTCGATCACTTGGTATCGTACTTCAAGATACCCATCTCTTTACAGGGACTATCGCTGAAAATATTGCCTACGGC
CGTTCGGATGCGACTCGCGAGGAAATTCTTGAAGCTGCTCGTATTGCTAACGTGGATTCCTTTGTTCAACATCTGGACAA
TGGTTACGATACTGTTCTTACAGACGATGGTGCAGGCTTGTCTAATGGTCAACGACAGCTGATTGCCATTGCGCGTGCAG
CCCTTGCCAATGCGCCAGTCTTGATTCTGGACGAAGCAACGTCTTCGATTGACTCTCGGACAGAGAAGATGGTGCAAGAA
GGGATGGACCGCCTTATGGAAGGACGTACGGTCTTTGTTATCGCCCACCGTCTTTCAACCATCGTTAACTCTGACGTTAT
CATGGTTATGGACCACGGACGTATCATTGAACGTGGTGACCATGACAGCCTTATGGAACAAGGTGGTACTTACTACCGAC
TTTATACTGGTGGTCTTGAAATTGATTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(29-305)

ABC transporter (ABC_tran)

(399-548)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

36.748

98.875

0.363