Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   A6J82_RS07535 Genome accession   NZ_CP020449
Coordinates   1423364..1425097 (+) Length   577 a.a.
NCBI ID   WP_000647638.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain FDAARGOS_254     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1418364..1430097
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J82_RS07515 (A6J82_07530) glyA 1418788..1420044 (+) 1257 WP_000575545.1 serine hydroxymethyltransferase -
  A6J82_RS07520 (A6J82_07535) - 1420049..1421026 (+) 978 WP_000968655.1 nucleoid-associated protein -
  A6J82_RS07525 (A6J82_07540) - 1421028..1421630 (+) 603 WP_000472259.1 lysozyme family protein -
  A6J82_RS07530 (A6J82_07545) - 1421642..1423363 (+) 1722 WP_000826946.1 ABC transporter ATP-binding protein -
  A6J82_RS07535 (A6J82_07550) rcrQ 1423364..1425097 (+) 1734 WP_000647638.1 ABC transporter ATP-binding protein Regulator
  A6J82_RS07540 (A6J82_07555) - 1425111..1425308 (+) 198 WP_000746859.1 hypothetical protein -
  A6J82_RS07555 (A6J82_07565) - 1426807..1428525 (-) 1719 WP_000222544.1 phospho-sugar mutase -
  A6J82_RS07560 (A6J82_07570) - 1428635..1429207 (-) 573 WP_000728786.1 ECF transporter S component -
  A6J82_RS07565 (A6J82_07575) coaC 1429253..1429795 (-) 543 WP_000595814.1 phosphopantothenoylcysteine decarboxylase -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 64178.90 Da        Isoelectric Point: 8.5097

>NTDB_id=186542 A6J82_RS07535 WP_000647638.1 1423364..1425097(+) (rcrQ) [Streptococcus agalactiae strain FDAARGOS_254]
MKASHPKKIQKKLVQDLLSKKSLVGMALLGTVVQVCLTVYLPVLIGQAVDVVLSPHSMILLLPIMWKMIAVILANAIIQW
INPLLYNRLIFHYVASLRKAVMEKLNLLPIAYLDKRGIGDLISRVTTDTEQLSNGLLMVFNQFFVGLLTILVTIFSMAKI
DLLMLFLVLFLTPLSLFLARFIAKKSYHLYQNQTASRGRQTQFIEEMVSQESLIQAFSAQEESSNHFRTINQEYANFSQS
AIFYSSTVNPSTRFINSLIYGFLAGIGALRIMSGAFSVGQLITFLNYVNQYTKPFNDISSVLSEMQSALACAERLYSILE
ESSPNITGTEKLDSSTVKGQIDFKNVVFGYNKSKPLLNGINLHIPAGAKVAIVGPTGAGKSTLINLLMRFYEVDGGNILL
DGKPITDYEPSQLRQEIGMVLQETWLKSATIHDNIAYANPKASRDEVIEAAKAANADFFIKQLPNGYDTYLEDAGDSLSQ
GQCQLLTIARIFLKLPRILILDEATSSIDTRTEVLVQEAFQMLMKGRTSFIIAHRLSTIQTADIILVMVSGEIVEVGNHS
ELIAQKGIYYQMQNAQK

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=186542 A6J82_RS07535 WP_000647638.1 1423364..1425097(+) (rcrQ) [Streptococcus agalactiae strain FDAARGOS_254]
ATGAAAGCAAGTCATCCTAAAAAGATACAAAAAAAGCTTGTTCAAGATCTTCTTTCTAAAAAAAGCTTAGTAGGAATGGC
ATTATTAGGGACGGTTGTACAAGTTTGCCTCACTGTTTATTTGCCTGTTCTAATTGGACAAGCGGTAGACGTTGTATTAT
CGCCTCATTCTATGATATTATTGTTACCTATAATGTGGAAGATGATTGCAGTCATTTTAGCAAATGCTATTATTCAATGG
ATTAATCCTCTGCTCTATAACCGCTTAATTTTTCATTATGTTGCTTCTTTAAGAAAGGCTGTAATGGAAAAGTTGAATCT
ATTGCCTATAGCTTACCTTGATAAACGTGGCATAGGTGACTTGATTAGTCGTGTGACTACCGATACGGAGCAATTATCAA
ATGGTTTATTAATGGTTTTTAACCAGTTCTTTGTTGGTTTATTAACTATTCTAGTTACTATTTTTAGTATGGCAAAGATT
GATTTATTAATGCTTTTTTTGGTATTATTTCTGACGCCTTTATCACTCTTTCTAGCCCGCTTTATTGCTAAAAAGAGTTA
TCACTTATATCAAAATCAAACGGCATCACGAGGACGACAAACTCAATTCATTGAAGAGATGGTGAGTCAAGAAAGCCTTA
TTCAAGCATTCAGTGCGCAAGAAGAAAGTAGTAATCATTTTAGGACTATTAATCAAGAGTATGCTAACTTTTCTCAATCA
GCAATTTTTTATTCTTCAACTGTCAATCCATCAACCCGATTTATCAATAGTTTGATTTATGGCTTCTTAGCTGGGATTGG
TGCCCTTCGTATTATGTCAGGGGCTTTTAGTGTTGGTCAATTAATCACTTTCTTAAATTATGTCAATCAATATACTAAGC
CATTTAATGACATCTCTTCCGTCCTGTCTGAGATGCAAAGTGCTCTGGCTTGTGCAGAACGCCTTTACTCTATTTTAGAA
GAATCGTCACCAAATATAACAGGGACAGAAAAACTTGATTCATCAACGGTCAAGGGTCAAATCGATTTTAAAAATGTTGT
TTTTGGTTATAATAAATCAAAACCACTATTGAATGGTATTAATTTACACATTCCAGCAGGAGCTAAGGTCGCTATTGTAG
GACCAACAGGTGCTGGGAAGTCTACTTTAATCAATTTATTAATGCGTTTCTATGAAGTTGACGGGGGAAATATCCTTTTA
GATGGTAAGCCTATTACTGATTATGAGCCATCACAATTAAGGCAAGAAATTGGAATGGTATTACAAGAAACGTGGTTAAA
AAGTGCTACGATTCACGATAACATTGCATATGCCAATCCTAAAGCTAGCCGTGACGAAGTGATAGAGGCTGCAAAAGCAG
CTAATGCAGATTTCTTTATCAAACAATTACCGAATGGATATGATACGTATTTAGAAGATGCTGGAGACTCGTTATCACAG
GGGCAATGTCAGCTATTGACAATTGCTCGTATTTTTCTTAAATTACCTAGAATATTGATATTAGATGAGGCAACATCGTC
TATAGATACTCGTACTGAAGTTCTTGTTCAAGAAGCATTCCAAATGTTGATGAAGGGGAGAACAAGCTTTATTATTGCAC
ATCGCTTATCTACCATTCAAACAGCAGATATTATTTTAGTTATGGTATCTGGTGAAATTGTAGAAGTGGGTAACCACTCT
GAATTAATAGCTCAAAAAGGTATTTATTATCAAATGCAAAATGCACAAAAGTAG

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(357-506)

ABC transporter transmembrane region (ABC_membrane)

(25-294)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

36.814

97.92

0.36