Detailed information NTG0185666

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: A9I65_RS05730
• Genome accession: NZ_CP016073
• Coordinates: 1246635..1249034 (+)
• Length: 799 a.a.
• NCBI ID: WP_014613741.1
• Uniprot ID: A0A3D8ZF31
• Organism: Staphylococcus pseudintermedius strain 081661 isolate 20081661
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1241635..1254034

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A9I65_RS05705 (A9I65_05705)	-	1241811..1241996 (+)	186	WP_014613736.1	CsbD family protein	-
A9I65_RS05710 (A9I65_05710)	-	1242460..1243476 (-)	1017	WP_014613737.1	LLM class flavin-dependent oxidoreductase	-
A9I65_RS05715 (A9I65_05715)	-	1243685..1244830 (+)	1146	WP_014613738.1	cysteine desulfurase family protein	-
A9I65_RS05720 (A9I65_05720)	mnmA	1244830..1245942 (+)	1113	WP_014613739.1	tRNA 2-thiouridine(34) synthase MnmA	-
A9I65_RS05725 (A9I65_05725)	-	1245958..1246632 (+)	675	WP_037542839.1	tetratricopeptide repeat protein	-
A9I65_RS05730 (A9I65_05730)	recD2	1246635..1249034 (+)	2400	WP_014613741.1	ATP-dependent RecD-like DNA helicase	Machinery gene
A9I65_RS05735 (A9I65_05735)	alaS	1249280..1251910 (+)	2631	WP_037542840.1	alanine--tRNA ligase	-
A9I65_RS05740 (A9I65_05740)	-	1251973..1252245 (+)	273	WP_014613743.1	IreB family regulatory phosphoprotein	-
A9I65_RS05745 (A9I65_05745)	ruvX	1252238..1252666 (+)	429	WP_014613744.1	Holliday junction resolvase RuvX	-
A9I65_RS05750 (A9I65_05750)	-	1252680..1253000 (+)	321	WP_014613745.1	DUF1292 domain-containing protein	-

Sequence

Protein

• Length: 799 a.a.
• Molecular weight: 90330.64 Da
• Isoelectric Point: 4.5526

>NTDB_id=185666 A9I65_RS05730 WP_014613741.1 1246635..1249034(+) (recD2) [Staphylococcus pseudintermedius strain 081661 isolate 20081661]
MENPTLFDHTFIKGTVEMILFQNTDNHYTVLKVEIEETNGDFDDMATVVGYFPNMVEDESYTFKGQIVQHARYGQQLKAE
TFQKEIPHTKDAVIAYLSSELFKGIGKKTAESIVNTLGENAIHDILKDESVIEQVPKLSKAKQQQIVEQIYANQESEQVM
IRLNELGFGSKLAMDIYKFYKSDTLTVLDQNPYQLVYDIKGVGFNKADQLAQQLGIHPEHPDRLKAGLLYLVEDTCIKQG
HTYLPQEALINETIQLLSQGKDSSVDYDTMTQILAELVEEKRLVNQEEMVAIPSLYYSEIKSTQNLYKIFANREHLTTFD
ASDIQLHIGEIEEVNEVHYAPSQKEALEYAIQHKVMLLTGGPGTGKTTVIKGIVQLYAEIHGISLDYDDYSDEDDYPVVL
AAPTGRASKRLHEATGLEAMTIHRLIGWNQDTKPQDKLDNEIHAKLIIIDEMSMVDTWLFHQFMDAVPIDAQVVLVGDED
QLPSVGPGQVFKDLIDANVLPRINLTEVYRQQDGSSIIDLAHRMKLGEKVDITQRFHDRSFIPCQTDQIPQVVEKVVNNA
VQKGYTMADIQVLAPMYRGNAGIKKLNQILQGILNPLSDESQREIEFGDVLFRKGDKVLQLINRPNDNVFNGDIGVIVGI
FWAKENALNKDVVVVDYDGNEITYLRSDLTELTHAYCTSIHKAQGSEFPIVIMPIVKQYFRMLQKPILYTGLTRAKQSLV
FLGDADAFNIGLATAGQTRLTQLQTFLMQYFTPEDTDDKTDTDTASAEFILTEATMFKIHPMINMGEVTPYDFLEIDKV

Nucleotide

• Length: 2400 bp

>NTDB_id=185666 A9I65_RS05730 WP_014613741.1 1246635..1249034(+) (recD2) [Staphylococcus pseudintermedius strain 081661 isolate 20081661]
ATGGAAAATCCAACACTGTTTGACCATACATTTATTAAAGGCACCGTAGAGATGATTTTGTTTCAGAATACGGACAATCA
TTACACAGTGCTTAAAGTTGAAATAGAAGAAACAAATGGTGACTTTGATGATATGGCAACAGTGGTTGGATATTTTCCGA
ATATGGTAGAAGATGAGTCGTACACTTTTAAAGGCCAAATCGTGCAACATGCAAGATATGGTCAGCAATTAAAAGCTGAG
ACGTTTCAAAAAGAAATTCCTCATACCAAAGATGCTGTTATTGCATATTTATCTAGTGAATTGTTTAAAGGGATTGGTAA
AAAAACAGCAGAATCCATTGTCAATACATTAGGTGAAAATGCGATTCATGACATTTTGAAAGATGAATCTGTCATCGAAC
AAGTGCCTAAACTGTCTAAAGCGAAACAACAACAAATTGTCGAGCAGATTTATGCCAACCAAGAAAGTGAACAAGTGATG
ATTCGATTGAACGAACTTGGTTTTGGTTCAAAGCTTGCGATGGACATTTACAAGTTTTATAAAAGTGATACATTAACGGT
ACTCGACCAAAATCCGTATCAACTTGTTTATGACATTAAAGGGGTTGGTTTTAACAAAGCGGACCAACTGGCACAACAGC
TCGGTATTCATCCAGAGCACCCCGACCGTTTAAAAGCCGGCTTACTTTATTTAGTTGAAGATACGTGTATTAAACAAGGT
CATACGTACCTCCCACAAGAAGCGTTAATCAATGAAACGATTCAACTGCTGTCTCAGGGCAAAGATTCAAGTGTCGACTA
TGACACCATGACGCAAATTTTAGCTGAATTAGTTGAAGAAAAACGACTAGTGAATCAAGAGGAAATGGTGGCCATCCCAA
GTCTTTATTATTCGGAAATTAAAAGCACACAAAATTTATATAAAATATTTGCCAATCGAGAGCATTTAACTACATTTGAT
GCTTCAGATATTCAATTACATATTGGGGAAATTGAAGAGGTCAATGAAGTACATTATGCCCCTTCTCAAAAAGAGGCTTT
AGAATATGCGATTCAACATAAAGTCATGCTTCTCACGGGTGGACCAGGTACAGGGAAAACAACTGTCATTAAAGGAATTG
TCCAGTTATATGCAGAAATTCACGGCATCTCATTAGATTACGATGACTATTCAGATGAAGATGATTATCCGGTCGTATTA
GCTGCACCAACCGGAAGAGCGTCTAAACGTTTACATGAAGCGACAGGGTTAGAAGCAATGACGATTCACCGCTTAATTGG
TTGGAATCAAGATACGAAGCCGCAAGACAAATTAGACAATGAAATTCATGCGAAATTGATTATTATTGATGAAATGTCTA
TGGTCGACACTTGGCTATTCCATCAATTTATGGATGCAGTTCCTATAGATGCCCAAGTCGTATTAGTCGGTGATGAAGAC
CAGCTTCCATCAGTTGGCCCTGGACAAGTTTTTAAAGATCTCATTGATGCAAATGTATTACCGCGCATCAATTTAACTGA
AGTTTATCGCCAACAGGACGGCTCCAGCATTATTGATTTAGCGCATCGTATGAAACTCGGTGAAAAAGTTGATATTACCC
AACGTTTTCACGATCGTTCGTTTATTCCATGTCAAACCGATCAAATTCCACAAGTCGTAGAAAAAGTCGTCAACAATGCC
GTGCAAAAAGGGTATACAATGGCAGATATTCAAGTGCTCGCGCCGATGTATCGTGGTAATGCAGGGATTAAAAAGCTCAA
TCAAATTTTACAAGGCATTTTGAACCCTTTGTCAGACGAATCGCAACGTGAGATTGAATTTGGTGATGTTCTATTTCGTA
AAGGCGACAAAGTATTGCAACTGATTAATCGTCCAAACGATAATGTGTTTAATGGTGATATTGGTGTTATTGTCGGTATT
TTTTGGGCAAAGGAAAATGCTTTAAATAAAGATGTCGTGGTCGTTGATTATGATGGGAACGAAATTACTTATTTACGCTC
TGATTTGACGGAATTGACACATGCATATTGTACTTCGATTCATAAAGCGCAAGGTTCAGAGTTTCCAATTGTCATCATGC
CGATTGTTAAGCAGTATTTTAGAATGTTACAAAAACCGATTTTATATACTGGATTAACGCGTGCCAAACAATCGCTCGTT
TTTCTTGGTGATGCAGATGCTTTTAATATCGGGTTAGCGACTGCGGGTCAAACGCGATTAACACAATTACAAACGTTCTT
AATGCAATATTTTACTCCGGAAGATACTGATGATAAAACAGATACTGATACGGCTTCGGCTGAGTTTATTTTAACTGAAG
CGACTATGTTTAAAATCCATCCGATGATTAATATGGGTGAAGTGACACCTTATGACTTTTTAGAAATTGACAAAGTTTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (674-721)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (586-656)

• AAA domain (AAA_30) (339-546)

3D structure

• AlphaFold DB: A0A3D8ZF31

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	49.435	99.75	0.493