Detailed information NTG0185633

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: A9I66_RS06030
• Genome accession: NZ_CP016072
• Coordinates: 1290975..1293374 (+)
• Length: 799 a.a.
• NCBI ID: WP_014613741.1
• Uniprot ID: A0A3D8ZF31
• Organism: Staphylococcus pseudintermedius strain NA45 isolate UWMNA45
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1285975..1298374

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A9I66_RS06005 (A9I66_06005)	-	1286151..1286336 (+)	186	WP_014613736.1	CsbD family protein	-
A9I66_RS06010 (A9I66_06010)	-	1286800..1287816 (-)	1017	WP_014613737.1	LLM class flavin-dependent oxidoreductase	-
A9I66_RS06015 (A9I66_06015)	-	1288025..1289170 (+)	1146	WP_014613738.1	cysteine desulfurase family protein	-
A9I66_RS06020 (A9I66_06020)	mnmA	1289203..1290282 (+)	1080	WP_155259758.1	tRNA 2-thiouridine(34) synthase MnmA	-
A9I66_RS06025 (A9I66_06025)	-	1290298..1290972 (+)	675	WP_065354190.1	tetratricopeptide repeat protein	-
A9I66_RS06030 (A9I66_06030)	recD2	1290975..1293374 (+)	2400	WP_014613741.1	ATP-dependent RecD-like DNA helicase	Machinery gene
A9I66_RS06035 (A9I66_06035)	alaS	1293620..1296250 (+)	2631	WP_065354191.1	alanine--tRNA ligase	-
A9I66_RS06040 (A9I66_06040)	-	1296313..1296585 (+)	273	WP_014613743.1	IreB family regulatory phosphoprotein	-
A9I66_RS06045 (A9I66_06045)	ruvX	1296578..1297006 (+)	429	WP_014613744.1	Holliday junction resolvase RuvX	-
A9I66_RS06050 (A9I66_06050)	-	1297020..1297340 (+)	321	WP_014613745.1	DUF1292 domain-containing protein	-

Sequence

Protein

• Length: 799 a.a.
• Molecular weight: 90330.64 Da
• Isoelectric Point: 4.5526

>NTDB_id=185633 A9I66_RS06030 WP_014613741.1 1290975..1293374(+) (recD2) [Staphylococcus pseudintermedius strain NA45 isolate UWMNA45]
MENPTLFDHTFIKGTVEMILFQNTDNHYTVLKVEIEETNGDFDDMATVVGYFPNMVEDESYTFKGQIVQHARYGQQLKAE
TFQKEIPHTKDAVIAYLSSELFKGIGKKTAESIVNTLGENAIHDILKDESVIEQVPKLSKAKQQQIVEQIYANQESEQVM
IRLNELGFGSKLAMDIYKFYKSDTLTVLDQNPYQLVYDIKGVGFNKADQLAQQLGIHPEHPDRLKAGLLYLVEDTCIKQG
HTYLPQEALINETIQLLSQGKDSSVDYDTMTQILAELVEEKRLVNQEEMVAIPSLYYSEIKSTQNLYKIFANREHLTTFD
ASDIQLHIGEIEEVNEVHYAPSQKEALEYAIQHKVMLLTGGPGTGKTTVIKGIVQLYAEIHGISLDYDDYSDEDDYPVVL
AAPTGRASKRLHEATGLEAMTIHRLIGWNQDTKPQDKLDNEIHAKLIIIDEMSMVDTWLFHQFMDAVPIDAQVVLVGDED
QLPSVGPGQVFKDLIDANVLPRINLTEVYRQQDGSSIIDLAHRMKLGEKVDITQRFHDRSFIPCQTDQIPQVVEKVVNNA
VQKGYTMADIQVLAPMYRGNAGIKKLNQILQGILNPLSDESQREIEFGDVLFRKGDKVLQLINRPNDNVFNGDIGVIVGI
FWAKENALNKDVVVVDYDGNEITYLRSDLTELTHAYCTSIHKAQGSEFPIVIMPIVKQYFRMLQKPILYTGLTRAKQSLV
FLGDADAFNIGLATAGQTRLTQLQTFLMQYFTPEDTDDKTDTDTASAEFILTEATMFKIHPMINMGEVTPYDFLEIDKV

Nucleotide

• Length: 2400 bp

>NTDB_id=185633 A9I66_RS06030 WP_014613741.1 1290975..1293374(+) (recD2) [Staphylococcus pseudintermedius strain NA45 isolate UWMNA45]
ATGGAAAATCCAACACTGTTTGACCATACATTTATTAAAGGCACCGTAGAGATGATTTTGTTTCAGAATACGGACAATCA
TTACACAGTGCTTAAAGTTGAAATAGAAGAAACAAATGGTGACTTTGATGATATGGCAACAGTGGTTGGATATTTTCCGA
ATATGGTAGAAGATGAGTCGTACACTTTTAAAGGCCAAATCGTGCAACATGCAAGATATGGTCAGCAATTAAAAGCTGAG
ACGTTTCAAAAAGAAATTCCTCATACCAAAGATGCTGTTATTGCATATTTATCTAGTGAATTGTTTAAAGGGATTGGTAA
AAAAACAGCAGAATCCATTGTCAATACATTAGGTGAAAATGCGATTCATGACATTTTGAAAGATGAATCTGTCATCGAAC
AAGTGCCTAAACTGTCTAAAGCGAAACAACAACAAATTGTCGAGCAGATTTATGCCAACCAAGAAAGTGAACAAGTGATG
ATTCGATTGAACGAACTTGGTTTTGGTTCAAAGCTTGCGATGGACATTTACAAGTTTTATAAAAGTGATACATTAACGGT
ACTCGACCAAAATCCGTATCAACTTGTTTATGACATTAAAGGGGTTGGTTTTAACAAAGCGGACCAACTGGCACAACAGC
TCGGTATTCATCCAGAGCACCCCGACCGTTTAAAAGCCGGCTTACTTTATTTAGTTGAAGATACGTGTATTAAACAAGGT
CATACGTACCTCCCACAAGAAGCGTTAATCAATGAAACGATTCAACTGCTGTCTCAGGGCAAAGATTCAAGTGTCGACTA
TGACACCATGACGCAAATTTTAGCTGAATTAGTTGAAGAAAAACGACTAGTGAATCAAGAGGAAATGGTGGCCATCCCAA
GTCTTTATTATTCGGAAATTAAAAGCACACAAAATTTATATAAAATATTTGCCAATCGAGAGCATTTAACTACATTTGAT
GCTTCAGATATTCAATTACATATTGGGGAAATTGAAGAGGTCAATGAAGTACATTATGCCCCTTCTCAAAAAGAGGCTTT
AGAATATGCGATTCAACATAAAGTCATGCTTCTCACGGGTGGACCAGGTACAGGGAAAACAACTGTCATTAAAGGAATTG
TCCAGTTATATGCAGAAATTCACGGCATCTCATTAGATTACGATGACTATTCAGATGAAGATGATTATCCGGTCGTATTA
GCTGCACCAACCGGAAGAGCGTCTAAACGTTTACATGAAGCGACAGGGTTAGAAGCAATGACGATTCACCGCTTAATTGG
TTGGAATCAAGATACGAAGCCGCAAGACAAATTAGACAATGAAATTCATGCGAAATTGATTATTATTGATGAAATGTCTA
TGGTCGACACTTGGCTATTTCATCAATTTATGGATGCAGTCCCTATAGATGCCCAAGTCGTATTAGTCGGTGATGAAGAC
CAGCTTCCATCAGTTGGCCCTGGACAAGTTTTTAAAGATCTCATTGATGCAAATGTATTACCGCGCATCAATTTAACTGA
AGTTTATCGCCAACAGGACGGCTCCAGTATTATTGATTTAGCGCATCGTATGAAACTCGGTGAAAAAGTTGATATTACCC
AACGTTTTCACGATCGTTCGTTTATTCCATGTCAAACCGATCAAATTCCACAAGTCGTAGAAAAAGTCGTCAACAATGCC
GTGCAAAAAGGGTATACAATGGCAGATATTCAAGTGCTCGCGCCGATGTATCGTGGTAATGCAGGGATTAAAAAGCTCAA
TCAAATTTTACAAGGCATTTTGAACCCTTTGTCAGACGAATCGCAACGTGAGATTGAATTTGGTGATGTTCTATTTCGTA
AAGGCGACAAAGTATTGCAACTGATTAATCGTCCAAACGATAATGTGTTTAATGGTGATATTGGTGTTATTGTCGGTATT
TTTTGGGCAAAGGAAAATGCTTTAAATAAAGATGTCGTGGTCGTTGATTATGATGGGAACGAAATTACTTATTTACGCTC
TGATTTGACGGAATTGACACATGCATATTGTACTTCGATTCATAAAGCGCAAGGTTCAGAGTTTCCAATTGTCATCATGC
CGATTGTTAAGCAGTATTTTAGAATGTTACAAAAACCGATTTTATATACTGGATTAACGCGTGCCAAACAATCGCTCGTT
TTTCTTGGTGATGCAGATGCTTTTAATATCGGGTTAGCGACTGCGGGTCAAACGCGATTAACACAATTACAAACGTTCTT
AATGCAATATTTTACTCCGGAAGATACTGATGATAAAACAGATACTGATACGGCTTCGGCTGAGTTTATTTTAACTGAAG
CGACTATGTTTAAAATCCATCCGATGATTAATATGGGTGAAGTGACACCTTATGACTTTTTAGAAATTGACAAAGTTTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (674-721)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (586-656)

• AAA domain (AAA_30) (339-546)

3D structure

• AlphaFold DB: A0A3D8ZF31

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	49.435	99.75	0.493