Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   B4W66_RS08715 Genome accession   NZ_CP020027
Coordinates   1696343..1697017 (-) Length   224 a.a.
NCBI ID   WP_002982458.1    Uniprot ID   A0ABU0A9I5
Organism   Streptococcus pyogenes strain STAB090229     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1691343..1702017
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B4W66_RS08700 (B4W66_08705) - 1692981..1694369 (-) 1389 WP_076639496.1 sensor histidine kinase -
  B4W66_RS08705 (B4W66_08710) - 1694366..1695019 (-) 654 WP_002991237.1 response regulator transcription factor -
  B4W66_RS08710 (B4W66_08715) - 1695113..1696330 (-) 1218 WP_002993552.1 ABC transporter permease -
  B4W66_RS08715 (B4W66_08720) amiE 1696343..1697017 (-) 675 WP_002982458.1 ABC transporter ATP-binding protein Regulator
  B4W66_RS08720 (B4W66_08725) - 1697004..1698272 (-) 1269 WP_023610761.1 efflux RND transporter periplasmic adaptor subunit -
  B4W66_RS08725 (B4W66_08730) - 1698696..1698980 (-) 285 WP_002982442.1 hypothetical protein -
  B4W66_RS08730 (B4W66_08735) - 1699127..1699423 (-) 297 WP_076639497.1 DUF4298 domain-containing protein -
  B4W66_RS08735 (B4W66_08740) - 1699556..1701493 (-) 1938 WP_087486727.1 LPXTG cell wall anchor domain-containing protein -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 24826.67 Da        Isoelectric Point: 5.7977

>NTDB_id=183994 B4W66_RS08715 WP_002982458.1 1696343..1697017(-) (amiE) [Streptococcus pyogenes strain STAB090229]
MLNLKDIRKSYHLGTEEFAILKGIDLEVNEGDFLAIMGPSGSGKSTLMNIIGCLDKPGSGSYAIEGRDVSSLSDNELADL
RNQKIGFVFQNFNLMPKLTACQNVELPLTYMNVPKKERRKRALEMLKLVGLEERSEFKPMELSGGQKQRVAIARALVTNP
SFILGDEPTGALDTKTSVQIMDLFKQFNDNGKTIIIITHEPEVAALCKKTVILRDGNIEHSDIE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=183994 B4W66_RS08715 WP_002982458.1 1696343..1697017(-) (amiE) [Streptococcus pyogenes strain STAB090229]
TTGTTAAACCTTAAAGATATTCGAAAAAGCTATCATCTTGGAACTGAAGAATTTGCGATTTTAAAAGGAATCGATTTAGA
AGTTAACGAGGGTGACTTTTTAGCCATCATGGGACCATCAGGTTCGGGAAAGTCAACATTGATGAATATCATTGGGTGTT
TAGATAAGCCTGGCTCTGGCTCATATGCCATTGAAGGCAGAGACGTGTCATCCTTATCTGATAATGAACTTGCTGATTTG
CGTAATCAAAAAATCGGCTTTGTTTTTCAAAATTTTAACCTGATGCCCAAGCTAACAGCTTGTCAAAATGTCGAATTGCC
CTTGACTTATATGAATGTTCCTAAAAAAGAGCGTCGCAAACGAGCCCTAGAGATGTTAAAGCTAGTAGGACTAGAAGAAC
GTAGTGAATTTAAACCGATGGAGCTATCTGGTGGGCAAAAACAGCGTGTAGCGATTGCAAGAGCTTTAGTCACTAACCCG
AGTTTTATCCTTGGTGATGAGCCAACAGGTGCACTAGACACAAAAACCAGCGTCCAAATCATGGACCTATTTAAACAATT
CAATGATAACGGCAAAACGATTATTATCATCACACACGAGCCTGAAGTAGCTGCCCTATGCAAAAAGACGGTGATCCTAA
GAGATGGTAATATAGAACATTCCGATATAGAGTAA

Domains


Predicted by InterProScan.

(21-169)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

34.454

100

0.366


Multiple sequence alignment