Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   BWR56_RS09045 Genome accession   NZ_CP019562
Coordinates   1814539..1816305 (-) Length   588 a.a.
NCBI ID   WP_076984839.1    Uniprot ID   -
Organism   Streptococcus oralis strain S.MIT/ORALIS-351     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1809539..1821305
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BWR56_RS09020 (BWR56_1786) - 1810157..1810591 (-) 435 WP_076984836.1 cytidine deaminase family protein -
  BWR56_RS09025 (BWR56_1787) gltX 1810604..1812064 (-) 1461 WP_049505386.1 glutamate--tRNA ligase -
  BWR56_RS09030 (BWR56_1788) - 1812192..1813541 (-) 1350 WP_071852036.1 glucose-6-phosphate isomerase -
  BWR56_RS09040 (BWR56_1789) - 1813710..1814399 (-) 690 WP_076984838.1 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein -
  BWR56_RS09045 (BWR56_1790) rcrQ 1814539..1816305 (-) 1767 WP_076984839.1 ABC transporter ATP-binding protein Regulator
  BWR56_RS09050 (BWR56_1791) - 1816307..1818013 (-) 1707 WP_076984840.1 ABC transporter ATP-binding protein -
  BWR56_RS09055 (BWR56_1792) - 1818220..1819236 (+) 1017 WP_049505381.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  BWR56_RS09060 (BWR56_1793) galU 1819258..1820157 (+) 900 WP_000811022.1 UTP--glucose-1-phosphate uridylyltransferase GalU -
  BWR56_RS09065 - 1820377..1820664 (+) 288 WP_000401878.1 hypothetical protein -

Sequence

Protein


Download         Length: 588 a.a.        Molecular weight: 65344.58 Da        Isoelectric Point: 5.0292

>NTDB_id=180993 BWR56_RS09045 WP_076984839.1 1814539..1816305(-) (rcrQ) [Streptococcus oralis strain S.MIT/ORALIS-351]
MKTVRFFWNYFKVYKFSFVIVILMVAVATIAQALFPVFSGQAVTELANLVLAYQNGTSDLAWQSLSALMLNLALVVLALV
VSSLIYMTFMTRVIAESTNEMRKGLFGKLSCLTVSFFDRHQDGDILSRFTSDLDNILQAFNESLVQVMSNIALYIGLIFV
MFSRNVTLALITVASTPVAFLMLVFIVKMARKYTNLQQKEVGKLNAYMDESISGQKAVIVQGIQDDIVAGFVEQNERVRK
ATFKGRMFSGILFPVMNGMSLVNTAIVIFAGSAVLLNDPSIETTTALGLIVMFTQFSQQYYQPIIQVAASWGSLQLAFTG
ADRIQEMFDAEEEIRPQNAPAFKELREGVEINHIDFSYVPDKPILKDVSISAPKGQMIAVVGPTGSGKTTIMNLINRFYD
VDAGSICFDGKDIRDYDLDSLRSKVGIVLQDSVLFSGTIRDNIRFGVPDASQEMVEAAAKATHIHDYIVSLPDKYDTLID
DEQNIFSTGQKQLISIARTLMTDPQVLILDEATSNVDTVTESKIQHAMEAVVAGRTSFVIAHRLKTILNADQIIVLKDGE
VIERGNHHELLKLGGFYSELYHNQFVFE

Nucleotide


Download         Length: 1767 bp        

>NTDB_id=180993 BWR56_RS09045 WP_076984839.1 1814539..1816305(-) (rcrQ) [Streptococcus oralis strain S.MIT/ORALIS-351]
ATGAAAACCGTTCGATTTTTCTGGAATTATTTTAAAGTTTACAAGTTCTCCTTTGTCATTGTGATTCTGATGGTTGCAGT
TGCGACGATTGCCCAAGCCCTCTTTCCAGTTTTTTCAGGTCAAGCAGTAACAGAGCTAGCTAACCTAGTTCTAGCTTATC
AAAATGGAACTTCCGACCTAGCCTGGCAGAGTTTATCGGCTCTGATGCTGAATCTAGCTCTGGTTGTCCTCGCCCTAGTA
GTATCCAGTTTGATTTACATGACCTTTATGACTCGTGTGATTGCTGAGTCAACAAATGAGATGCGAAAGGGCCTCTTTGG
CAAACTTTCCTGTTTGACGGTTTCTTTCTTTGATCGCCATCAGGATGGTGACATCCTCTCTCGCTTCACAAGTGACTTGG
ATAACATCCTTCAAGCCTTCAATGAAAGCCTAGTTCAGGTCATGAGCAATATTGCTCTTTACATCGGTTTGATTTTTGTC
ATGTTTTCAAGAAATGTGACGCTAGCCCTGATAACAGTAGCCAGTACCCCAGTGGCCTTTCTCATGTTGGTTTTCATCGT
GAAAATGGCCCGCAAGTACACCAATCTCCAGCAAAAAGAGGTTGGGAAACTCAACGCCTACATGGACGAAAGTATTTCAG
GTCAGAAAGCTGTTATCGTACAAGGAATTCAAGACGACATCGTAGCAGGCTTTGTGGAGCAAAATGAGCGCGTGCGCAAG
GCAACTTTTAAAGGGAGAATGTTCTCAGGCATCCTCTTTCCAGTTATGAATGGGATGAGCTTGGTCAATACGGCCATCGT
CATTTTTGCAGGTTCGGCTGTCTTGCTGAACGATCCAAGTATCGAAACAACGACAGCCCTAGGTTTGATTGTCATGTTTA
CCCAATTTTCTCAGCAGTACTACCAGCCGATTATCCAGGTGGCTGCGAGTTGGGGGAGCCTCCAGTTGGCCTTTACCGGA
GCGGATCGTATCCAAGAAATGTTCGATGCAGAAGAAGAGATCCGTCCGCAAAATGCGCCTGCCTTTAAGGAATTGCGAGA
AGGTGTTGAAATCAATCACATTGATTTCTCTTATGTGCCAGACAAGCCGATCTTGAAAGATGTTAGCATTTCAGCTCCTA
AGGGGCAGATGATAGCAGTTGTCGGCCCGACTGGTTCAGGGAAAACGACCATCATGAACCTCATCAATCGTTTCTACGAT
GTGGATGCAGGCAGCATTTGCTTTGATGGCAAAGACATCCGTGACTACGACTTGGACAGCCTGCGGAGTAAGGTCGGTAT
TGTCTTGCAGGATTCGGTCTTATTTAGCGGAACAATCCGAGACAATATCCGCTTTGGTGTGCCAGATGCCAGTCAGGAAA
TGGTCGAAGCAGCTGCCAAGGCAACTCATATTCATGACTATATCGTAAGCTTGCCTGACAAGTATGATACCCTTATTGAT
GATGAGCAAAATATCTTCTCGACTGGGCAGAAACAATTGATTTCCATTGCTCGAACCTTGATGACAGATCCTCAAGTCCT
AATCTTAGATGAAGCGACTTCCAATGTCGATACCGTAACAGAAAGCAAGATTCAACATGCTATGGAGGCAGTAGTAGCAG
GTCGAACCAGTTTTGTCATTGCCCATCGTCTCAAGACCATCCTCAATGCCGATCAGATTATTGTCCTCAAAGATGGAGAG
GTCATTGAACGTGGAAATCATCACGAGTTGCTCAAACTCGGCGGTTTCTACTCAGAACTGTATCACAACCAATTTGTCTT
CGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(365-514)

ABC transporter transmembrane region (ABC_membrane)

(19-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

36.661

98.81

0.362