Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   BWR56_RS06055 Genome accession   NZ_CP019562
Coordinates   1235216..1236964 (-) Length   582 a.a.
NCBI ID   WP_049505682.1    Uniprot ID   A0ABU5G3B4
Organism   Streptococcus oralis strain S.MIT/ORALIS-351     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1230216..1241964
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BWR56_RS06025 - 1231526..1232305 (-) 780 WP_076984653.1 replication initiator protein A -
  BWR56_RS06030 (BWR56_1195) - 1232302..1232475 (-) 174 WP_000159607.1 hypothetical protein -
  BWR56_RS06035 (BWR56_1197) rplL 1232677..1233045 (-) 369 WP_001196964.1 50S ribosomal protein L7/L12 -
  BWR56_RS06040 (BWR56_1198) rplJ 1233120..1233620 (-) 501 WP_001287274.1 50S ribosomal protein L10 -
  BWR56_RS06050 (BWR56_1199) - 1233856..1235115 (-) 1260 WP_076984654.1 TRZ/ATZ family protein -
  BWR56_RS06055 (BWR56_1200) rcrQ 1235216..1236964 (-) 1749 WP_049505682.1 ABC transporter ATP-binding protein Regulator
  BWR56_RS06060 (BWR56_1201) - 1236966..1238690 (-) 1725 WP_049505683.1 ABC transporter ATP-binding protein -
  BWR56_RS06065 (BWR56_1202) msrB 1238750..1239688 (-) 939 WP_076984655.1 peptide-methionine (R)-S-oxide reductase MsrB -
  BWR56_RS06075 (BWR56_1204) thrB 1239947..1240816 (-) 870 WP_076984656.1 homoserine kinase -

Sequence

Protein


Download         Length: 582 a.a.        Molecular weight: 64803.36 Da        Isoelectric Point: 8.0610

>NTDB_id=180961 BWR56_RS06055 WP_049505682.1 1235216..1236964(-) (rcrQ) [Streptococcus oralis strain S.MIT/ORALIS-351]
MRRQTANQTLKRLAIDLASHPFLLFLAFLGTIAQVGLSIYLPILIGQVIDQVLVAGSSLVFWQIFIQMILVVIGNTLVQW
ANPLLYNRLIFSYTKDLRERIIHKLHRLPIAFVDRQGSGEMVSRVTTDIEQLAAGLTMIFNQFFIGVLMILVSILAMLQI
HLLMTLLVLLLTPLSMVISRFIAKRSYHLFQKQTETRGIQTQLIEESLSQQPIIQSFNAQTEFIQRLHEANANYAGYSQS
AIFYSSTVNPSTRFVNALIYALLAGVGAYRIMMGSTLTIGRLVTFLNYVQQYTKPFNDISSVLAELQSALACAERVYAVL
ESPEVAETGKEVLTSDQVKGAISFKHVSFGYNPEKVLIKDLSIDIPAGSKVAIVGPTGAGKSTLINLLMRFYPINSGDIL
LDGRSIYDYTRASLRQQFGMVLQETWLKQGTIHDNIAFGNPEASREQVIAAAKAANVDFFIQQLPQGYDTNLENAGESLS
VGQAQLLTIARVFLAIPKILILDEATSSIDTRTEVLVQDAFAKLMKDRTSFIIAHRLSTIQDADLILVLVDGNIVEYGNH
QELMARKGKYYQMQKAATFSSE

Nucleotide


Download         Length: 1749 bp        

>NTDB_id=180961 BWR56_RS06055 WP_049505682.1 1235216..1236964(-) (rcrQ) [Streptococcus oralis strain S.MIT/ORALIS-351]
ATGAGACGACAAACCGCAAACCAGACGCTCAAACGTTTGGCCATAGATTTAGCAAGCCATCCCTTCCTCCTTTTCCTTGC
CTTTCTAGGAACTATTGCCCAAGTTGGCTTATCAATTTACCTACCTATTCTGATTGGGCAGGTCATTGACCAGGTTCTAG
TGGCTGGTTCTTCGCTAGTTTTTTGGCAGATTTTCATCCAGATGATCTTGGTGGTCATAGGAAATACATTGGTACAATGG
GCCAATCCTCTTCTTTATAATCGTCTAATCTTCTCTTATACTAAAGACTTGCGAGAGCGAATCATTCATAAGCTCCATCG
GTTACCGATTGCTTTTGTGGATCGGCAGGGCAGTGGAGAGATGGTCAGTCGTGTGACCACAGACATAGAACAGTTGGCAG
CTGGCTTGACCATGATTTTCAATCAATTTTTCATTGGAGTCTTGATGATTTTGGTTAGTATTCTAGCCATGCTCCAAATT
CACCTTCTCATGACCCTCTTGGTTTTGCTGTTGACGCCGCTGTCCATGGTGATTTCACGCTTTATTGCCAAACGCTCCTA
TCATCTCTTCCAGAAGCAAACAGAGACCAGGGGGATTCAGACTCAGTTGATTGAAGAGTCTCTTAGCCAGCAGCCTATTA
TCCAGTCCTTTAATGCTCAGACAGAGTTTATCCAAAGACTGCACGAGGCGAATGCCAACTACGCAGGCTATTCTCAGTCA
GCCATCTTTTATTCATCAACGGTTAATCCTTCGACTCGCTTTGTCAACGCGCTCATTTATGCCCTTCTGGCTGGGGTAGG
AGCTTATCGTATTATGATGGGGTCCACCTTGACCATCGGACGTTTAGTGACTTTTTTGAATTACGTCCAACAGTACACTA
AGCCCTTTAACGATATTTCTTCTGTTCTAGCCGAGTTGCAAAGTGCTCTTGCTTGCGCAGAGCGCGTCTATGCTGTCTTA
GAAAGTCCAGAGGTGGCTGAAACAGGTAAGGAAGTCTTGACCAGTGACCAAGTTAAGGGAGCCATTTCCTTTAAGCATGT
TTCTTTTGGCTACAATCCTGAGAAGGTTCTGATTAAGGATTTATCCATTGACATTCCTGCTGGTAGCAAGGTTGCCATCG
TTGGTCCGACAGGTGCTGGTAAGTCAACTCTTATCAATCTCCTCATGCGTTTTTATCCTATTAATTCAGGAGATATCTTG
TTAGACGGTCGTTCTATTTACGATTATACCCGAGCATCATTGAGACAGCAGTTTGGCATGGTGCTCCAAGAAACCTGGCT
CAAGCAAGGGACCATTCATGACAATATTGCCTTTGGAAATCCTGAAGCCAGTCGGGAACAAGTGATTGCTGCTGCAAAAG
CAGCCAACGTAGATTTTTTCATCCAACAGTTGCCACAGGGCTATGATACCAATTTGGAAAATGCAGGTGAATCTCTCTCT
GTCGGTCAAGCCCAGCTCTTGACCATCGCCCGAGTATTTCTAGCTATTCCAAAGATTCTTATCTTAGACGAGGCGACCTC
CTCCATCGATACACGGACAGAAGTGCTAGTACAGGATGCCTTTGCCAAACTCATGAAGGATCGCACAAGCTTTATCATTG
CTCACCGTTTGTCAACCATTCAGGATGCGGATTTGATTCTAGTCTTGGTGGATGGTAACATCGTGGAATACGGCAATCAT
CAGGAACTCATGGCTAGAAAGGGCAAGTATTACCAAATGCAAAAAGCAGCAACTTTTAGCTCTGAATAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(24-295)

ABC transporter (ABC_tran)

(359-507)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

37.258

97.766

0.364