Detailed information NTG0180602

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: A7E59_RS06410
• Genome accession: NZ_CP015552
• Coordinates: 1314443..1316863 (+)
• Length: 806 a.a.
• NCBI ID: WP_046099239.1
• Uniprot ID: A0AAJ0JQT4
• Organism: Staphylococcus carnosus strain TMW 2.1538
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1309443..1321863

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A7E59_RS06385 (A7E59_06240)	-	1309982..1310188 (+)	207	WP_015900483.1	CsbD family protein	-
A7E59_RS06390 (A7E59_06245)	-	1310229..1311227 (-)	999	WP_015900482.1	LLM class flavin-dependent oxidoreductase	-
A7E59_RS06395 (A7E59_06250)	-	1311409..1312548 (+)	1140	WP_015900481.1	cysteine desulfurase family protein	-
A7E59_RS06400 (A7E59_06255)	mnmA	1312551..1313663 (+)	1113	WP_015900480.1	tRNA 2-thiouridine(34) synthase MnmA	-
A7E59_RS06405 (A7E59_06260)	-	1313771..1314439 (+)	669	WP_046099238.1	tetratricopeptide repeat protein	-
A7E59_RS06410 (A7E59_06265)	recD2	1314443..1316863 (+)	2421	WP_046099239.1	ATP-dependent RecD-like DNA helicase	Machinery gene
A7E59_RS06415 (A7E59_06270)	alaS	1317170..1319800 (+)	2631	WP_046099240.1	alanine--tRNA ligase	-
A7E59_RS06420 (A7E59_06275)	-	1319869..1320132 (+)	264	WP_015900476.1	IreB family regulatory phosphoprotein	-
A7E59_RS06425 (A7E59_06280)	ruvX	1320135..1320563 (+)	429	WP_015900475.1	Holliday junction resolvase RuvX	-
A7E59_RS06430 (A7E59_06285)	-	1320586..1320897 (+)	312	WP_046099241.1	DUF1292 domain-containing protein	-
A7E59_RS06435 (A7E59_06290)	-	1321190..1321831 (+)	642	WP_046099242.1	O-methyltransferase	-

Sequence

Protein

• Length: 806 a.a.
• Molecular weight: 90908.05 Da
• Isoelectric Point: 4.4138

>NTDB_id=180602 A7E59_RS06410 WP_046099239.1 1314443..1316863(+) (recD2) [Staphylococcus carnosus strain TMW 2.1538]
MNNPTLFDYSMVKGTVEAILFQNKENFYTVLKVDPIETNEEFDSMPTVVGFFPEIVEGDVYTFKGQAVTHPRYGKQLKAE
TFEKELPQTKDAIVSYLSSDLFKGIGKKTAENIVDTLGENAINKILDDEQALAEVPHLSKKKQKQIAEQIYSNQEVEKIM
IRLHDLGFGPKLSMNIYQVYQVETLTEIEKNPYQLVYDVKGVGFNKADTLAKNLGIEYNDPERLKAGLLYTIEEECIKQG
HTYLPKDYVIEASQDTLSQVHSESIDAQLLEEMIVQLTEEEKLVEADETLSVPSLYYSEVKSVQNLYRIEAHQTKLETIE
QSDLQMHIGEIEDVNNVNYAASQKEALETAINSKVMLLTGGPGTGKTTVIKGIVELYAEIHGLSLDYDDYNEDDYPVALA
APTGRAAKRLQESTGLEAMTIHRLIGWSQETKPEDVLENEINAKLIIIDEMSMVDTWLFHQFLNAVPIDAQVILVGDEDQ
LPSVGPGQVFKDLIDSKVVPRVNLTEVYRQQDGSSIIELAHKMKLGQPIDITQRFHDRSFIPCSADQIPDVVNKVVTSAV
KKGYDMSDIQVLAPMYRGSAGIKRLNKVLQDILNPKQEDTREIEFGDVVFRKGDKVLQLVNRPSDNIFNGDIGVIQGIFW
ARENELNKDVLVVDFDGNEITFTKQDMMELTHAYCTSIHKAQGSEFPIVIMPIVKQYYRMLQRPIIYTGLTRAKQSLVFL
GDSQAFDIGMQTYGQVRMTRMAQLLRDYFGAETSESSDETESDADTNTVIAERNSKVIELSEETLFEIDPMIGMGNVTPY
SFANEK

Nucleotide

• Length: 2421 bp

>NTDB_id=180602 A7E59_RS06410 WP_046099239.1 1314443..1316863(+) (recD2) [Staphylococcus carnosus strain TMW 2.1538]
TTGAACAACCCTACATTATTTGATTATTCAATGGTCAAAGGTACAGTTGAAGCCATTTTGTTTCAAAACAAAGAAAACTT
CTACACTGTACTCAAAGTAGATCCGATCGAGACAAATGAAGAATTTGATAGTATGCCGACCGTTGTAGGGTTCTTTCCTG
AAATTGTGGAAGGAGATGTTTATACTTTTAAAGGTCAAGCTGTCACTCATCCTCGATATGGTAAACAATTAAAAGCAGAG
ACATTTGAAAAAGAATTACCTCAGACCAAAGATGCGATTGTAAGTTATCTCTCAAGTGATCTATTCAAAGGCATCGGAAA
GAAAACAGCCGAAAATATTGTAGATACACTTGGGGAAAATGCGATCAATAAAATTCTTGATGATGAACAAGCTTTAGCAG
AAGTACCGCACCTGTCTAAGAAAAAGCAAAAACAAATTGCAGAACAAATTTACAGTAATCAAGAAGTTGAAAAAATCATG
ATTCGCCTGCATGATTTAGGATTCGGTCCTAAATTATCGATGAATATCTATCAAGTCTACCAAGTTGAGACTCTTACTGA
AATTGAGAAAAATCCGTATCAGCTTGTCTATGATGTTAAAGGGGTCGGCTTTAATAAAGCTGATACATTAGCTAAAAATT
TAGGGATAGAATATAACGATCCTGAAAGATTAAAAGCTGGATTATTATATACAATTGAAGAAGAATGCATTAAACAAGGA
CATACGTACTTGCCGAAAGATTATGTGATTGAAGCATCTCAAGATACATTATCTCAAGTACATAGTGAATCAATTGATGC
TCAATTGTTAGAAGAGATGATTGTACAGTTGACTGAAGAAGAGAAGCTTGTAGAAGCAGATGAAACACTCTCTGTACCAA
GTTTATATTATTCGGAAGTTAAAAGTGTCCAAAATTTGTATCGAATTGAAGCTCATCAAACAAAACTAGAAACAATTGAA
CAATCAGACTTGCAGATGCATATCGGAGAAATAGAAGATGTTAATAACGTAAATTATGCTGCATCTCAAAAAGAAGCACT
TGAAACTGCTATTAATTCTAAAGTCATGTTGCTAACAGGTGGGCCAGGTACAGGTAAAACAACAGTGATAAAAGGTATTG
TAGAATTATATGCAGAAATTCATGGACTGTCTCTTGATTATGATGATTATAACGAAGATGATTATCCTGTCGCTTTAGCA
GCACCAACAGGCAGAGCAGCTAAAAGACTGCAAGAATCTACGGGATTAGAAGCCATGACGATACATCGGTTAATCGGTTG
GAGTCAAGAAACAAAACCAGAAGACGTTCTTGAAAATGAAATTAACGCTAAGCTGATTATTATCGACGAAATGTCGATGG
TCGACACCTGGTTATTCCACCAATTTTTAAATGCGGTGCCAATTGATGCACAAGTTATCCTAGTAGGTGATGAAGATCAA
TTACCTTCAGTAGGTCCAGGACAAGTATTTAAAGATTTAATTGATTCTAAAGTAGTGCCGCGTGTGAACTTGACTGAAGT
TTATCGTCAGCAAGACGGATCAAGCATTATCGAATTAGCACATAAAATGAAATTAGGGCAGCCGATTGATATTACACAAC
GTTTTCATGACCGCAGCTTTATTCCGTGCAGTGCAGATCAAATACCGGATGTAGTTAATAAAGTGGTCACTTCTGCTGTG
AAAAAAGGTTACGATATGAGTGATATTCAGGTACTTGCACCGATGTACAGAGGTAGTGCTGGTATTAAACGATTGAATAA
AGTACTTCAAGACATTTTAAACCCTAAACAAGAAGATACACGTGAAATTGAATTCGGCGATGTCGTTTTTCGAAAAGGCG
ATAAAGTACTCCAATTAGTTAATCGACCGAGTGATAATATTTTCAATGGAGATATCGGGGTGATTCAAGGTATCTTTTGG
GCAAGAGAAAATGAATTGAATAAAGACGTATTAGTCGTTGATTTTGACGGTAATGAAATTACATTTACCAAACAAGATAT
GATGGAACTTACGCATGCCTATTGTACTTCCATTCATAAAGCACAAGGATCAGAATTTCCAATTGTGATAATGCCGATAG
TTAAACAATATTACCGCATGCTGCAAAGACCGATTATTTATACTGGTTTGACACGAGCAAAACAATCTTTGGTTTTTCTA
GGTGACAGCCAAGCTTTCGATATCGGCATGCAAACCTATGGCCAAGTGCGAATGACACGTATGGCACAGTTATTGCGCGA
TTACTTCGGTGCAGAAACAAGTGAATCATCTGATGAAACCGAAAGCGATGCAGACACAAATACAGTCATTGCTGAGCGGA
ATTCAAAAGTTATTGAGTTATCGGAAGAAACATTATTTGAAATTGACCCTATGATTGGCATGGGCAATGTCACACCTTAT
AGCTTTGCGAATGAAAAATAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (585-655)

• AAA domain (AAA_30) (339-544)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (672-719)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	50.993	100	0.51