Detailed information NTG0180506

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: A2I66_RS06940
• Genome accession: NZ_CP015535
• Coordinates: 1400655..1403075 (+)
• Length: 806 a.a.
• NCBI ID: WP_053463920.1
• Uniprot ID: -
• Organism: Staphylococcus carnosus strain TMW 2.218
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1395655..1408075

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A2I66_RS06910	-	1395956..1396126 (+)	171	WP_156768895.1	hypothetical protein	-
A2I66_RS06915 (A2I66_06775)	-	1396195..1396401 (+)	207	WP_015900483.1	CsbD family protein	-
A2I66_RS06920 (A2I66_06780)	-	1396442..1397440 (-)	999	WP_015900482.1	LLM class flavin-dependent oxidoreductase	-
A2I66_RS06925 (A2I66_06785)	-	1397622..1398761 (+)	1140	WP_065865428.1	cysteine desulfurase family protein	-
A2I66_RS06930 (A2I66_06790)	mnmA	1398764..1399876 (+)	1113	WP_015900480.1	tRNA 2-thiouridine(34) synthase MnmA	-
A2I66_RS06935 (A2I66_06795)	-	1399984..1400658 (+)	675	WP_065865429.1	tetratricopeptide repeat protein	-
A2I66_RS06940 (A2I66_06800)	recD2	1400655..1403075 (+)	2421	WP_053463920.1	ATP-dependent RecD-like DNA helicase	Machinery gene
A2I66_RS06945 (A2I66_06805)	alaS	1403382..1406012 (+)	2631	WP_065865430.1	alanine--tRNA ligase	-
A2I66_RS06950 (A2I66_06810)	-	1406081..1406344 (+)	264	WP_015900476.1	IreB family regulatory phosphoprotein	-
A2I66_RS06955 (A2I66_06815)	ruvX	1406347..1406775 (+)	429	WP_015900475.1	Holliday junction resolvase RuvX	-
A2I66_RS06960 (A2I66_06820)	-	1406798..1407109 (+)	312	WP_015900474.1	DUF1292 domain-containing protein	-
A2I66_RS06965 (A2I66_06825)	-	1407402..1408043 (+)	642	WP_015900473.1	O-methyltransferase	-

Sequence

Protein

• Length: 806 a.a.
• Molecular weight: 90852.97 Da
• Isoelectric Point: 4.4138

>NTDB_id=180506 A2I66_RS06940 WP_053463920.1 1400655..1403075(+) (recD2) [Staphylococcus carnosus strain TMW 2.218]
MSNPTLFDYSMVKGTVEAILFQNKENFYTVLKVDPIETNEEFDSMPTVVGFFPEIAEGDVYTFKGQAVTHPRYGKQLKAE
TFEKELPQTKDAIVSYLSSDLFKGIGKKTAENIVDTLGENAINKILDDEQALAEVPHLSKKKQKQIAEQIYSNQEVEKIM
IRLHDLGFGPKLSMNIYQVYQVETLTEIEKNPYQLVYDVKGVGFNKADTLAKNLGIEYNDPERLKAGLLYTIEEECIKQG
HTYLPKDYVIEASQDTLSQVHSESIDAQLLEEMIVQLTEEEKLVEADETLSVPSLYYSEVKSVQNLYRIEAHQTKLETIE
QSDLQMHIGEIEDVNNVNYAASQKEALETAINSKVMLLTGGPGTGKTTVIKGIVELYAEIHGLSLDYDDYNEDDYPVALA
APTGRAAKRLQESTGLEAMTIHRLIGWSQETKPEDVLENEINAKLIIIDEMSMVDTWLFHQFLNAVPIDAQVILVGDEDQ
LPSVGPGQVFKDLIDSKVVPRVNLTEVYRQQDGSSIIELAHKMKLGQPIDITQRFHDRSFIPCSADQIPDVVNKVVTSAV
KKGYDMSDIQVLAPMYRGSAGIKRLNKVLQDILNPKQEDTREIEFGDVVFRKGDKVLQLVNRPSDNIFNGDIGVIQGIFW
ARENELNKDVLVVDFDGNEITFTKQDMMELTHAYCTSIHKAQGSEFPIVIMPIVKQYYRMLQRPIIYTGLTRAKQSLVFL
GDSQAFDIGMQTYGQVRMTRMAQLLRDYFGAETSESSDETESDADTNTVIAERNSKVIELSEETLFEIDPMIGMGNVTPY
SFANEK

Nucleotide

• Length: 2421 bp

>NTDB_id=180506 A2I66_RS06940 WP_053463920.1 1400655..1403075(+) (recD2) [Staphylococcus carnosus strain TMW 2.218]
TTGAGCAACCCTACATTATTTGATTATTCAATGGTCAAAGGTACAGTTGAAGCCATTTTGTTTCAAAACAAAGAAAACTT
CTACACTGTACTCAAAGTAGATCCGATCGAGACAAATGAAGAATTTGATAGTATGCCGACCGTTGTAGGGTTCTTTCCTG
AAATTGCGGAAGGAGATGTTTATACTTTTAAAGGTCAAGCTGTCACTCATCCTCGATATGGTAAACAATTAAAAGCAGAG
ACATTTGAAAAAGAATTACCTCAGACCAAAGATGCGATTGTAAGTTATCTCTCAAGTGATCTATTCAAAGGCATCGGAAA
GAAAACAGCCGAAAATATTGTAGATACACTTGGGGAAAATGCGATCAATAAAATTCTTGATGATGAACAAGCTTTAGCAG
AAGTACCGCACCTGTCCAAGAAAAAGCAAAAACAAATTGCAGAACAAATTTACAGTAATCAAGAAGTTGAAAAAATCATG
ATTCGCCTGCATGATTTAGGATTCGGTCCTAAATTATCGATGAATATCTATCAAGTCTACCAAGTTGAGACTCTTACTGA
AATTGAGAAAAATCCGTATCAGCTTGTCTATGATGTTAAAGGGGTCGGCTTTAATAAAGCTGATACATTAGCTAAAAATT
TAGGGATAGAATATAACGATCCTGAAAGATTAAAAGCTGGATTATTATATACAATTGAAGAAGAATGCATTAAACAAGGA
CATACGTACTTGCCGAAAGATTATGTGATTGAAGCATCTCAAGATACATTATCTCAAGTACATAGTGAATCAATTGATGC
TCAATTGTTAGAAGAGATGATTGTACAGTTGACTGAAGAAGAGAAACTTGTAGAAGCAGATGAAACACTCTCTGTACCAA
GTTTATATTATTCGGAAGTTAAAAGTGTCCAAAATTTGTATCGAATTGAAGCTCATCAAACAAAACTAGAAACAATTGAA
CAATCAGACTTGCAGATGCATATCGGAGAAATAGAAGATGTTAATAACGTAAATTATGCTGCATCTCAAAAAGAAGCACT
TGAAACTGCTATTAATTCTAAAGTCATGTTGCTAACAGGTGGGCCAGGTACAGGTAAAACAACAGTGATAAAAGGTATTG
TAGAATTATATGCAGAAATTCATGGACTGTCTCTTGATTATGATGATTATAACGAAGATGATTATCCTGTCGCTTTAGCA
GCACCAACAGGCAGAGCAGCTAAAAGACTGCAAGAATCTACGGGATTAGAAGCCATGACGATACATCGGTTAATCGGTTG
GAGTCAAGAAACAAAACCAGAAGACGTTCTTGAAAATGAAATTAACGCTAAGCTGATTATTATCGACGAAATGTCGATGG
TCGACACCTGGTTATTCCACCAATTTTTAAATGCGGTGCCAATTGATGCACAAGTTATCCTAGTAGGTGATGAAGATCAA
TTACCTTCAGTAGGTCCAGGACAAGTATTTAAAGATTTAATTGATTCTAAAGTAGTGCCGCGTGTGAACTTGACTGAAGT
TTATCGTCAGCAAGACGGATCAAGCATTATCGAATTAGCACATAAAATGAAATTAGGGCAGCCGATTGATATTACACAAC
GTTTTCATGACCGCAGCTTTATTCCGTGCAGTGCAGATCAAATACCGGATGTAGTTAATAAAGTGGTCACTTCTGCTGTG
AAAAAAGGTTACGATATGAGTGATATTCAGGTACTTGCACCGATGTACAGAGGTAGTGCTGGTATTAAACGATTGAATAA
AGTACTTCAAGACATTTTAAACCCTAAACAAGAAGATACACGTGAAATTGAATTCGGCGATGTCGTTTTTCGAAAAGGCG
ATAAAGTACTCCAATTAGTTAATCGACCGAGTGATAATATTTTCAATGGAGATATCGGGGTGATTCAAGGTATCTTTTGG
GCAAGAGAAAATGAATTGAATAAAGACGTATTAGTCGTTGATTTTGACGGTAATGAAATTACATTTACCAAACAAGATAT
GATGGAACTTACGCATGCCTATTGTACTTCCATTCATAAAGCACAAGGATCAGAATTTCCAATTGTGATAATGCCGATAG
TTAAACAATATTACCGCATGCTGCAAAGACCGATTATTTATACTGGTTTGACACGAGCAAAACAATCTTTGGTTTTTCTA
GGTGACAGCCAAGCTTTCGATATCGGCATGCAAACCTATGGCCAAGTGCGAATGACACGTATGGCACAGTTATTGCGCGA
TTACTTCGGTGCAGAAACAAGTGAATCATCTGATGAAACCGAAAGCGATGCAGACACAAATACAGTCATTGCTGAGCGGA
ATTCAAAAGTTATTGAGTTATCGGAAGAAACATTATTTGAAATTGACCCTATGATTGGCATGGGCAATGTCACACCTTAT
AGCTTTGCGAATGAAAAATAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (585-655)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (672-719)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

• AAA domain (AAA_30) (339-544)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	50.993	100	0.51