Detailed information NTG0180438

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: A2I65_RS06715
• Genome accession: NZ_CP015532
• Coordinates: 1370615..1373035 (+)
• Length: 806 a.a.
• NCBI ID: WP_053463920.1
• Uniprot ID: -
• Organism: Staphylococcus carnosus strain TMW 2.212
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1365615..1378035

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A2I65_RS06685	-	1365916..1366086 (+)	171	WP_253719938.1	hypothetical protein	-
A2I65_RS06690 (A2I65_06550)	-	1366155..1366361 (+)	207	WP_253719939.1	CsbD family protein	-
A2I65_RS06695 (A2I65_06555)	-	1366402..1367400 (-)	999	WP_015900482.1	LLM class flavin-dependent oxidoreductase	-
A2I65_RS06700 (A2I65_06560)	-	1367582..1368721 (+)	1140	WP_065865428.1	cysteine desulfurase family protein	-
A2I65_RS06705 (A2I65_06565)	mnmA	1368724..1369836 (+)	1113	WP_015900480.1	tRNA 2-thiouridine(34) synthase MnmA	-
A2I65_RS06710 (A2I65_06570)	-	1369944..1370618 (+)	675	WP_065865429.1	tetratricopeptide repeat protein	-
A2I65_RS06715 (A2I65_06575)	recD2	1370615..1373035 (+)	2421	WP_053463920.1	ATP-dependent RecD-like DNA helicase	Machinery gene
A2I65_RS06720 (A2I65_06580)	alaS	1373342..1375972 (+)	2631	WP_065865430.1	alanine--tRNA ligase	-
A2I65_RS06725 (A2I65_06585)	-	1376041..1376304 (+)	264	WP_015900476.1	IreB family regulatory phosphoprotein	-
A2I65_RS06730 (A2I65_06590)	ruvX	1376307..1376735 (+)	429	WP_015900475.1	Holliday junction resolvase RuvX	-
A2I65_RS06735 (A2I65_06595)	-	1376758..1377069 (+)	312	WP_015900474.1	DUF1292 domain-containing protein	-
A2I65_RS06740 (A2I65_06600)	-	1377362..1378003 (+)	642	WP_015900473.1	O-methyltransferase	-

Sequence

Protein

• Length: 806 a.a.
• Molecular weight: 90852.97 Da
• Isoelectric Point: 4.4138

>NTDB_id=180438 A2I65_RS06715 WP_053463920.1 1370615..1373035(+) (recD2) [Staphylococcus carnosus strain TMW 2.212]
MSNPTLFDYSMVKGTVEAILFQNKENFYTVLKVDPIETNEEFDSMPTVVGFFPEIAEGDVYTFKGQAVTHPRYGKQLKAE
TFEKELPQTKDAIVSYLSSDLFKGIGKKTAENIVDTLGENAINKILDDEQALAEVPHLSKKKQKQIAEQIYSNQEVEKIM
IRLHDLGFGPKLSMNIYQVYQVETLTEIEKNPYQLVYDVKGVGFNKADTLAKNLGIEYNDPERLKAGLLYTIEEECIKQG
HTYLPKDYVIEASQDTLSQVHSESIDAQLLEEMIVQLTEEEKLVEADETLSVPSLYYSEVKSVQNLYRIEAHQTKLETIE
QSDLQMHIGEIEDVNNVNYAASQKEALETAINSKVMLLTGGPGTGKTTVIKGIVELYAEIHGLSLDYDDYNEDDYPVALA
APTGRAAKRLQESTGLEAMTIHRLIGWSQETKPEDVLENEINAKLIIIDEMSMVDTWLFHQFLNAVPIDAQVILVGDEDQ
LPSVGPGQVFKDLIDSKVVPRVNLTEVYRQQDGSSIIELAHKMKLGQPIDITQRFHDRSFIPCSADQIPDVVNKVVTSAV
KKGYDMSDIQVLAPMYRGSAGIKRLNKVLQDILNPKQEDTREIEFGDVVFRKGDKVLQLVNRPSDNIFNGDIGVIQGIFW
ARENELNKDVLVVDFDGNEITFTKQDMMELTHAYCTSIHKAQGSEFPIVIMPIVKQYYRMLQRPIIYTGLTRAKQSLVFL
GDSQAFDIGMQTYGQVRMTRMAQLLRDYFGAETSESSDETESDADTNTVIAERNSKVIELSEETLFEIDPMIGMGNVTPY
SFANEK

Nucleotide

• Length: 2421 bp

>NTDB_id=180438 A2I65_RS06715 WP_053463920.1 1370615..1373035(+) (recD2) [Staphylococcus carnosus strain TMW 2.212]
TTGAGCAACCCTACATTATTTGATTATTCAATGGTCAAAGGTACAGTTGAAGCCATTTTGTTTCAAAACAAAGAAAACTT
CTACACTGTACTCAAAGTAGATCCGATCGAGACAAATGAAGAATTTGATAGTATGCCGACCGTTGTAGGGTTCTTTCCTG
AAATTGCGGAAGGAGATGTTTATACTTTTAAAGGTCAAGCTGTCACTCATCCTCGATATGGTAAACAATTAAAAGCAGAG
ACATTTGAAAAAGAATTACCTCAGACCAAAGATGCGATTGTAAGTTATCTCTCAAGTGATCTATTCAAAGGCATCGGAAA
GAAAACAGCCGAAAATATTGTAGATACACTTGGGGAAAATGCGATCAATAAAATTCTTGATGATGAACAAGCTTTAGCAG
AAGTACCGCACCTGTCCAAGAAAAAGCAAAAACAAATTGCAGAACAAATTTACAGTAATCAAGAAGTTGAAAAAATCATG
ATTCGCCTGCATGATTTAGGATTCGGTCCTAAATTATCGATGAATATCTATCAAGTCTACCAAGTTGAGACTCTTACTGA
AATTGAGAAAAATCCGTATCAGCTTGTCTATGATGTTAAAGGGGTCGGCTTTAATAAAGCTGATACATTAGCTAAAAATT
TAGGGATAGAATATAACGATCCTGAAAGATTAAAAGCTGGATTATTATATACAATTGAAGAAGAATGCATTAAACAAGGA
CATACGTACTTGCCGAAAGATTATGTGATTGAAGCATCTCAAGATACATTATCTCAAGTACATAGTGAATCAATTGATGC
TCAATTGTTAGAAGAGATGATTGTACAGTTGACTGAAGAAGAGAAACTTGTAGAAGCAGATGAAACACTCTCTGTACCAA
GTTTATATTATTCGGAAGTTAAAAGTGTCCAAAATTTGTATCGAATTGAAGCTCATCAAACAAAACTAGAAACAATTGAA
CAATCAGACTTGCAGATGCATATCGGAGAAATAGAAGATGTTAATAACGTAAATTATGCTGCATCTCAAAAAGAAGCACT
TGAAACTGCTATTAATTCTAAAGTCATGTTGCTAACAGGTGGGCCAGGTACAGGTAAAACAACAGTGATAAAAGGTATTG
TAGAATTATATGCAGAAATTCATGGACTGTCTCTTGATTATGATGATTATAACGAAGATGATTATCCTGTCGCTTTAGCA
GCACCAACAGGCAGAGCAGCTAAAAGACTGCAAGAATCTACGGGATTAGAAGCCATGACGATACATCGGTTAATCGGTTG
GAGTCAAGAAACAAAACCAGAAGACGTTCTTGAAAATGAAATTAACGCTAAGCTGATTATTATCGACGAAATGTCGATGG
TCGACACCTGGTTATTCCACCAATTTTTAAATGCGGTGCCAATTGATGCACAAGTTATCCTAGTAGGTGATGAAGATCAA
TTACCTTCAGTAGGTCCAGGACAAGTATTTAAAGATTTAATTGATTCTAAAGTAGTGCCGCGTGTGAACTTGACTGAAGT
TTATCGTCAGCAAGACGGATCAAGCATTATCGAATTAGCACATAAAATGAAATTAGGGCAGCCGATTGATATTACACAAC
GTTTTCATGACCGCAGCTTTATTCCGTGCAGTGCAGATCAAATACCGGATGTAGTTAATAAAGTGGTCACTTCTGCTGTG
AAAAAAGGTTACGATATGAGTGATATTCAGGTACTTGCACCGATGTACAGAGGTAGTGCTGGTATTAAACGATTGAATAA
AGTACTTCAAGACATTTTAAACCCTAAACAAGAAGATACACGTGAAATTGAATTCGGCGATGTCGTTTTTCGAAAAGGCG
ATAAAGTACTCCAATTAGTTAATCGACCGAGTGATAATATTTTCAATGGAGATATCGGGGTGATTCAAGGTATCTTTTGG
GCAAGAGAAAATGAATTGAATAAAGACGTATTAGTCGTTGATTTTGACGGTAATGAAATTACATTTACCAAACAAGATAT
GATGGAACTTACGCATGCCTATTGTACTTCCATTCATAAAGCACAAGGATCAGAATTTCCAATTGTGATAATGCCGATAG
TTAAACAATATTACCGCATGCTGCAAAGACCGATTATTTATACTGGTTTGACACGAGCAAAACAATCTTTGGTTTTTCTA
GGTGACAGCCAAGCTTTCGATATCGGCATGCAAACCTATGGCCAAGTGCGAATGACACGTATGGCACAGTTATTGCGCGA
TTACTTCGGTGCAGAAACAAGTGAATCATCTGATGAAACCGAAAGCGATGCAGACACAAATACAGTCATTGCTGAGCGGA
ATTCAAAAGTTATTGAGTTATCGGAAGAAACATTATTTGAAATTGACCCTATGATTGGCATGGGCAATGTCACACCTTAT
AGCTTTGCGAATGAAAAATAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (585-655)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (672-719)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

• AAA domain (AAA_30) (339-544)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	50.993	100	0.51