Detailed information NTG0180400

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: A2I62_RS06420
• Genome accession: NZ_CP015531
• Coordinates: 1324445..1326865 (+)
• Length: 806 a.a.
• NCBI ID: WP_015900478.1
• Uniprot ID: -
• Organism: Staphylococcus carnosus strain TMW 2.146
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1319445..1331865

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A2I62_RS06390	-	1319742..1319912 (+)	171	WP_015900484.1	hypothetical protein	-
A2I62_RS06395 (A2I62_06275)	-	1319981..1320187 (+)	207	WP_015900483.1	CsbD family protein	-
A2I62_RS06400 (A2I62_06280)	-	1320228..1321226 (-)	999	WP_015900482.1	LLM class flavin-dependent oxidoreductase	-
A2I62_RS06405 (A2I62_06285)	-	1321408..1322547 (+)	1140	WP_015900481.1	cysteine desulfurase family protein	-
A2I62_RS06410 (A2I62_06290)	mnmA	1322550..1323662 (+)	1113	WP_015900480.1	tRNA 2-thiouridine(34) synthase MnmA	-
A2I62_RS06415 (A2I62_06295)	-	1323770..1324441 (+)	672	WP_015900479.1	tetratricopeptide repeat protein	-
A2I62_RS06420 (A2I62_06300)	recD2	1324445..1326865 (+)	2421	WP_015900478.1	ATP-dependent RecD-like DNA helicase	Machinery gene
A2I62_RS06425 (A2I62_06305)	alaS	1327172..1329802 (+)	2631	WP_015900477.1	alanine--tRNA ligase	-
A2I62_RS06430 (A2I62_06310)	-	1329871..1330134 (+)	264	WP_015900476.1	IreB family regulatory phosphoprotein	-
A2I62_RS06435 (A2I62_06315)	ruvX	1330137..1330565 (+)	429	WP_015900475.1	Holliday junction resolvase RuvX	-
A2I62_RS06440 (A2I62_06320)	-	1330588..1330899 (+)	312	WP_015900474.1	DUF1292 domain-containing protein	-
A2I62_RS06445 (A2I62_06325)	-	1331192..1331833 (+)	642	WP_015900473.1	O-methyltransferase	-

Sequence

Protein

• Length: 806 a.a.
• Molecular weight: 90853.91 Da
• Isoelectric Point: 4.3869

>NTDB_id=180400 A2I62_RS06420 WP_015900478.1 1324445..1326865(+) (recD2) [Staphylococcus carnosus strain TMW 2.146]
MSNPTLFDYSMVKGTVEAILFQNKENFYTVLKVDPIETNEEFDSMPTVVGFFPEIAEGDVYTFKGQAVTHPRYGKQLKAE
TFEKELPQTKDAIVSYLSSDLFKGIGKKTAENIVDTLGENAINKILDDEQALAEVPHLSKKKQKQIAEQIYSNQEVEKIM
IRLHDLGFGPKLSMNIYQVYQVETLTEIEENPYQLVYDVKGVGFNKADTLAKNLGIEYNDPERLKAGLLYTIEEECIKQG
HTYLPKDYVIEASQDTLSQVHSESIDAQLLEEMIVQLTEEEKLVEADETLSVPSLYYSEVKSVQNLYRIEAHQTKLETIE
QSDLQMHIGEIEDVNNVNYAASQKEALETAINSKVMLLTGGPGTGKTTVIKGIVELYAEIHGLSLDYDDYNEDDYPVALA
APTGRAAKRLQESTGLEAMTIHRLIGWSQETKPEDVLENEINAKLIIIDEMSMVDTWLFHQFLNAVPIDAQVILVGDEDQ
LPSVGPGQVFKDLIDSKVVPRVNLTEVYRQQDGSSIIELAHKMKLGQPIDITQRFHDRSFIPCSADQIPDVVNKVVTSAV
KKGYDMSDIQVLAPMYRGSAGIKRLNKVLQDILNPKQEDTREIEFGDVVFRKGDKVLQLVNRPSDNIFNGDIGVIQGIFW
ARENELNKDVLVVDFDGNEITFTKQDMMELTHAYCTSIHKAQGSEFPIVIMPIVKQYYRMLQRPIIYTGLTRAKQSLVFL
GDSQAFDIGMQTYGQVRMTRMAQLLRDYFGAETSESSDETESDADTNTVIAERNSKVIELSEETLFEIDPMIGMGNVTPY
SFANEK

Nucleotide

• Length: 2421 bp

>NTDB_id=180400 A2I62_RS06420 WP_015900478.1 1324445..1326865(+) (recD2) [Staphylococcus carnosus strain TMW 2.146]
TTGAGCAACCCTACATTATTTGATTATTCAATGGTCAAAGGTACAGTTGAAGCCATTTTGTTTCAAAACAAAGAAAACTT
CTACACTGTACTCAAAGTAGATCCGATCGAGACAAATGAAGAATTTGATAGTATGCCGACCGTTGTAGGGTTCTTTCCTG
AAATTGCGGAAGGAGATGTTTATACTTTTAAAGGTCAAGCTGTCACTCATCCTCGATATGGTAAACAATTAAAAGCAGAG
ACATTTGAAAAAGAATTACCTCAGACCAAAGATGCGATTGTAAGTTATCTCTCAAGTGATCTATTCAAAGGCATCGGAAA
GAAAACAGCCGAAAATATTGTAGATACACTTGGGGAAAATGCGATCAATAAAATTCTTGATGATGAACAAGCTTTAGCAG
AAGTACCGCACCTGTCTAAGAAAAAGCAAAAACAAATTGCAGAACAAATTTACAGTAATCAAGAAGTTGAAAAAATCATG
ATTCGCCTGCATGATTTAGGATTCGGTCCTAAATTATCGATGAATATCTATCAAGTCTACCAAGTTGAGACTCTTACTGA
AATTGAGGAAAATCCGTATCAGCTTGTCTATGATGTTAAAGGGGTCGGCTTTAATAAAGCTGATACATTAGCTAAAAATT
TAGGGATAGAATATAACGATCCTGAAAGATTAAAAGCTGGATTATTATATACAATTGAAGAAGAATGCATTAAACAAGGA
CATACGTACTTGCCGAAAGATTATGTGATTGAAGCATCTCAAGATACATTATCTCAAGTACATAGTGAATCAATTGATGC
TCAATTGTTAGAAGAGATGATTGTACAGTTGACTGAAGAAGAGAAGCTTGTAGAAGCAGATGAAACACTCTCTGTACCAA
GTTTATATTATTCGGAAGTTAAAAGTGTCCAAAATTTGTATCGAATTGAAGCTCATCAAACAAAACTAGAAACAATTGAA
CAATCAGACTTGCAGATGCATATCGGAGAAATAGAAGATGTTAATAACGTAAATTATGCTGCATCTCAAAAAGAAGCACT
TGAAACTGCTATTAATTCTAAAGTCATGTTGCTAACAGGTGGGCCAGGTACAGGTAAAACAACAGTGATAAAAGGTATTG
TAGAATTATATGCAGAAATTCATGGACTGTCTCTTGATTATGATGATTATAACGAAGATGATTATCCTGTCGCTTTAGCA
GCACCAACAGGCAGAGCAGCTAAAAGACTGCAAGAATCTACGGGATTAGAAGCCATGACGATACATCGGTTAATCGGTTG
GAGTCAAGAAACAAAACCAGAAGACGTTCTTGAAAATGAAATTAACGCTAAGCTGATTATTATCGACGAAATGTCGATGG
TCGACACCTGGTTATTCCACCAATTTTTAAATGCGGTGCCAATTGATGCACAAGTTATCCTAGTAGGTGATGAAGATCAA
TTACCTTCAGTAGGTCCAGGACAAGTATTTAAAGATTTAATTGATTCTAAAGTAGTGCCGCGTGTGAACTTGACTGAAGT
TTATCGTCAGCAAGACGGATCAAGCATTATCGAATTAGCACATAAAATGAAATTAGGGCAGCCGATTGATATTACACAAC
GTTTTCATGACCGCAGCTTTATTCCGTGCAGTGCAGATCAAATACCGGATGTAGTTAATAAAGTGGTCACTTCTGCTGTG
AAAAAAGGTTACGATATGAGTGATATTCAGGTACTTGCACCGATGTACAGAGGTAGTGCTGGTATTAAACGATTGAATAA
AGTACTTCAAGACATTTTAAACCCTAAACAAGAAGATACACGTGAAATTGAATTCGGCGATGTCGTTTTTCGAAAAGGCG
ATAAAGTACTCCAATTAGTTAATCGACCGAGTGATAATATTTTCAATGGAGATATCGGGGTGATTCAAGGTATCTTTTGG
GCAAGAGAAAATGAATTGAATAAAGACGTATTAGTCGTTGATTTTGACGGTAATGAAATTACATTTACCAAACAAGATAT
GATGGAACTTACGCATGCCTATTGTACTTCCATTCATAAAGCACAAGGATCAGAATTTCCAATTGTGATAATGCCGATAG
TTAAACAATATTACCGCATGCTGCAAAGACCGATTATTTATACTGGTTTGACACGAGCAAAACAATCTTTGGTTTTTCTA
GGTGACAGCCAAGCTTTCGATATCGGCATGCAAACCTATGGCCAAGTGCGAATGACACGTATGGCACAGTTATTGCGCGA
TTACTTCGGTGCAGAAACAAGTGAATCATCTGATGAAACCGAAAGCGATGCAGACACAAATACAGTCATTGCTGAGCGGA
ATTCAAAAGTTATTGAGTTATCGGAAGAAACATTATTTGAAATTGACCCTATGATTGGCATGGGCAATGTCACACCTTAT
AGCTTTGCGAATGAAAAATAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (585-655)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (672-719)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

• AAA domain (AAA_30) (339-544)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	51.117	100	0.511