Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   A4V09_RS02910 Genome accession   NZ_CP015405
Coordinates   627209..629053 (+) Length   614 a.a.
NCBI ID   WP_065541017.1    Uniprot ID   A0A1C7I7H2
Organism   Blautia pseudococcoides strain YL58     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 622209..634053
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A4V09_RS02895 (A4V09_02855) - 622969..624357 (+) 1389 WP_065541014.1 MATE family efflux transporter -
  A4V09_RS02900 (A4V09_02860) - 624598..625032 (+) 435 WP_065541015.1 MarR family winged helix-turn-helix transcriptional regulator -
  A4V09_RS02905 (A4V09_02865) - 625051..627216 (+) 2166 WP_065541016.1 ABC transporter ATP-binding protein -
  A4V09_RS02910 (A4V09_02870) rcrQ 627209..629053 (+) 1845 WP_065541017.1 ABC transporter ATP-binding protein Regulator
  A4V09_RS02920 (A4V09_02880) aroF 629577..630587 (+) 1011 WP_065541019.1 3-deoxy-7-phosphoheptulonate synthase -
  A4V09_RS02925 (A4V09_02885) - 630592..632799 (+) 2208 WP_065541020.1 DNA topoisomerase III -
  A4V09_RS02930 (A4V09_02890) - 633003..633356 (-) 354 WP_065541021.1 metalloregulator ArsR/SmtB family transcription factor -

Sequence

Protein


Download         Length: 614 a.a.        Molecular weight: 68530.46 Da        Isoelectric Point: 7.0074

>NTDB_id=179189 A4V09_RS02910 WP_065541017.1 627209..629053(+) (rcrQ) [Blautia pseudococcoides strain YL58]
MSNIARRPRGPMGGHGKGMPGEKAKDFKGAMKRLVKYMERYKFRLMLMILFAVGGTVFNIVGPKILGKATTELFNGLVSK
INGGSGINFDKIVQILLGCLCLYLVSALLSFIQGFIMTGISNDVTYSLRKDISQKINRIPMKYFESRTHGEILSRITNDV
DTLQMGINQSVTQLITSCTTLIGVLVMMLSINVWMTLAALLILPISMAIISKVMKHSQKYFQAQQKYLGEVNGQVEEIYS
GHNVVKAFNKEESVIGEFEKTNEKLYSSAWRSQFFSGMMMPIMQFVGNLGYVMVALLGGFMVIKSKIEVGDVQAFFQYIR
NFTQPIQQIAQVTNMLQSSAAASERVFEFLDVEEEVQTVENPADVSHIDGNVEICHTSFGYDPDKIIIHDFSASVKAGQK
VAIVGPTGAGKTTMIKLLMRFYDVNTGEILIDGHNIKDFNRSELRELFGMVLQDTWLFHGTIMENIRYGRLDATDEEVIA
AAKAAHAHHFIMSQPGGYQMVLNEETNNISQGQKQLLTIARAILADNRILILDEATSSVDTRTEERIQKAMDNLMKGRTS
FVIAHRLSTIRDADLILVMKDGDIIEQGTHEALLEAGGFYANLYNSQFERAEAM

Nucleotide


Download         Length: 1845 bp        

>NTDB_id=179189 A4V09_RS02910 WP_065541017.1 627209..629053(+) (rcrQ) [Blautia pseudococcoides strain YL58]
ATGAGTAATATTGCGAGAAGACCGAGAGGGCCGATGGGTGGTCACGGAAAAGGAATGCCGGGGGAGAAGGCAAAAGATTT
TAAGGGAGCCATGAAACGCCTGGTGAAATACATGGAACGGTATAAGTTCCGTTTGATGCTGATGATCCTGTTTGCTGTGG
GAGGCACGGTATTTAATATTGTGGGACCTAAGATTTTAGGCAAGGCCACCACAGAGCTGTTTAACGGACTGGTATCCAAG
ATAAACGGCGGCAGTGGGATCAATTTTGACAAGATTGTTCAGATCCTTTTGGGATGCCTCTGCCTGTACCTGGTCAGCGC
CCTGCTGTCCTTTATTCAGGGATTTATCATGACCGGGATATCCAATGATGTGACGTACAGCCTGAGAAAAGATATTTCCC
AGAAGATCAACAGAATTCCCATGAAATATTTTGAGAGCAGAACCCACGGTGAGATCCTTTCACGTATCACCAATGATGTA
GATACTCTGCAGATGGGAATCAACCAGAGTGTGACCCAGCTCATTACCTCCTGCACCACGTTGATCGGTGTGCTTGTGAT
GATGCTGAGTATCAATGTATGGATGACACTGGCGGCCCTGCTGATCCTGCCTATATCCATGGCGATCATCAGTAAAGTCA
TGAAACATTCCCAGAAGTATTTCCAGGCACAGCAGAAATATCTGGGTGAAGTAAACGGGCAGGTGGAGGAAATCTACAGC
GGACACAACGTGGTAAAGGCCTTCAACAAGGAAGAGTCCGTGATCGGTGAATTTGAAAAGACAAACGAAAAGCTGTACAG
CTCTGCATGGCGTTCCCAGTTTTTCTCCGGCATGATGATGCCCATCATGCAGTTTGTGGGAAATCTGGGATATGTGATGG
TCGCCCTTCTGGGTGGATTTATGGTAATTAAGAGCAAGATTGAAGTGGGGGATGTGCAGGCGTTTTTCCAGTATATCAGA
AACTTTACGCAGCCTATCCAGCAGATCGCCCAGGTGACAAATATGCTGCAGTCTTCAGCCGCTGCATCTGAGAGGGTGTT
TGAATTTCTGGATGTTGAGGAGGAAGTGCAGACTGTGGAAAATCCCGCAGATGTAAGCCATATTGACGGCAATGTGGAAA
TCTGCCATACTTCTTTCGGCTATGATCCGGATAAGATCATTATCCACGATTTCTCTGCTTCCGTAAAAGCAGGGCAGAAA
GTGGCAATTGTAGGACCGACGGGTGCCGGCAAGACTACCATGATCAAGCTGCTGATGCGGTTCTATGATGTGAATACGGG
AGAAATCCTCATTGACGGTCATAATATTAAAGACTTTAACAGAAGTGAGCTGCGGGAATTGTTCGGTATGGTACTGCAGG
ATACCTGGCTGTTCCACGGGACCATTATGGAAAATATCCGCTATGGACGGCTGGATGCCACAGACGAAGAGGTGATCGCA
GCGGCGAAAGCAGCACACGCACATCATTTCATTATGTCACAGCCGGGCGGTTACCAGATGGTGCTGAATGAGGAGACAAA
CAATATTTCCCAGGGACAAAAACAGCTTCTGACCATTGCCAGGGCGATTCTGGCGGATAACAGGATCCTGATCCTGGATG
AGGCTACCTCCTCTGTGGATACCAGAACAGAAGAACGGATTCAGAAGGCCATGGATAACCTGATGAAGGGCAGGACCAGC
TTTGTGATTGCCCATCGTCTTTCTACGATCCGGGATGCGGATTTGATTCTGGTCATGAAAGACGGAGATATCATTGAACA
GGGTACCCATGAAGCCTTGCTTGAGGCAGGCGGGTTTTATGCGAATCTGTATAACAGCCAATTTGAGAGGGCAGAGGCAA
TGTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(389-537)

ABC transporter transmembrane region (ABC_membrane)

(45-325)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1C7I7H2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

50.947

94.625

0.482

Multiple sequence alignment