Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | A5J11_RS10970 | Genome accession | NZ_CP015173 |
| Coordinates | 2234843..2235142 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844410.1 | Uniprot ID | A0A7R6NZL1 |
| Organism | Staphylococcus aureus strain RIVM6519 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2229843..2240142
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A5J11_RS10945 (A5J11_10935) | gcvPA | 2231055..2232401 (-) | 1347 | WP_000019691.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| A5J11_RS10950 (A5J11_10940) | gcvT | 2232421..2233512 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| A5J11_RS10955 (A5J11_10945) | - | 2233671..2234195 (-) | 525 | WP_001015120.1 | shikimate kinase | - |
| A5J11_RS10960 (A5J11_10950) | - | 2234185..2234331 (-) | 147 | WP_001792109.1 | hypothetical protein | - |
| A5J11_RS10965 (A5J11_10955) | comGF | 2234428..2234925 (-) | 498 | WP_001788897.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| A5J11_RS10970 (A5J11_10960) | comGE | 2234843..2235142 (-) | 300 | WP_000844410.1 | hypothetical protein | Machinery gene |
| A5J11_RS10975 (A5J11_10965) | comGD | 2235129..2235575 (-) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| A5J11_RS10980 (A5J11_10970) | comGC | 2235553..2235864 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| A5J11_RS10985 (A5J11_10975) | comGB | 2235878..2236948 (-) | 1071 | WP_000776422.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| A5J11_RS10990 (A5J11_10980) | comGA | 2236920..2237894 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| A5J11_RS10995 (A5J11_10985) | - | 2237946..2238569 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| A5J11_RS11000 (A5J11_10990) | - | 2238566..2238895 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| A5J11_RS11005 (A5J11_10995) | - | 2238895..2239881 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| A5J11_RS11010 (A5J11_11000) | - | 2239878..2240081 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11079.18 Da Isoelectric Point: 9.9215
>NTDB_id=177269 A5J11_RS10970 WP_000844410.1 2234843..2235142(-) (comGE) [Staphylococcus aureus strain RIVM6519]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQSIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQSIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=177269 A5J11_RS10970 WP_000844410.1 2234843..2235142(-) (comGE) [Staphylococcus aureus strain RIVM6519]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAATCAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAATCAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus N315 |
100 |
100 |
1 |
| comGE | Staphylococcus aureus MW2 |
85.965 |
100 |
0.99 |