Detailed information NTG0176759

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: A4G25_RS01315
• Genome accession: NZ_CP015114
• Coordinates: 250747..253167 (+)
• Length: 806 a.a.
• NCBI ID: WP_047131822.1
• Uniprot ID: A0A143P8G5
• Organism: Staphylococcus condimenti strain DSM 11674
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 245747..258167

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A4G25_RS12930	-	246053..246217 (+)	165	WP_156483151.1	hypothetical protein	-
A4G25_RS01290 (A4G25_01290)	-	246291..246497 (+)	207	WP_047131827.1	CsbD family protein	-
A4G25_RS01295 (A4G25_01295)	-	246533..247531 (-)	999	WP_047131826.1	LLM class flavin-dependent oxidoreductase	-
A4G25_RS01300 (A4G25_01300)	-	247713..248852 (+)	1140	WP_047131825.1	cysteine desulfurase family protein	-
A4G25_RS01305 (A4G25_01305)	mnmA	248855..249967 (+)	1113	WP_047131824.1	tRNA 2-thiouridine(34) synthase MnmA	-
A4G25_RS01310 (A4G25_01310)	-	250075..250743 (+)	669	WP_047131823.1	tetratricopeptide repeat protein	-
A4G25_RS01315 (A4G25_01315)	recD2	250747..253167 (+)	2421	WP_047131822.1	ATP-dependent RecD-like DNA helicase	Machinery gene
A4G25_RS01320 (A4G25_01320)	alaS	253475..256105 (+)	2631	WP_047131821.1	alanine--tRNA ligase	-
A4G25_RS01325 (A4G25_01325)	-	256174..256437 (+)	264	WP_047131820.1	IreB family regulatory phosphoprotein	-
A4G25_RS01330 (A4G25_01330)	ruvX	256440..256868 (+)	429	WP_047131819.1	Holliday junction resolvase RuvX	-
A4G25_RS01335 (A4G25_01335)	-	256891..257202 (+)	312	WP_047131818.1	DUF1292 domain-containing protein	-
A4G25_RS01340 (A4G25_01340)	-	257490..258131 (+)	642	WP_047131817.1	O-methyltransferase	-

Sequence

Protein

• Length: 806 a.a.
• Molecular weight: 90919.16 Da
• Isoelectric Point: 4.4085

>NTDB_id=176759 A4G25_RS01315 WP_047131822.1 250747..253167(+) (recD2) [Staphylococcus condimenti strain DSM 11674]
MSNPTLFDYSMVKGTVEAILFQNKENFYTVLKVDPIETNEEFDSMPTVVGFFPEIAEGDVYTFKGQAVTHPRYGKQLKAE
TFEKELPQTKDAIVSYLSSDLFKGIGKKTAENIVDTLGENAINKILDDEQVLAEVPHLSKKKQKQIAEQIYSNQEVEKIM
IRLHDLGFGPKLSMNIYQVYQVETLTEIEKNPYQLVYDVKGVGFNKADTLAKNLGIEYNDPERLKAGLLYTIEEECIKQG
HTYLPKDYVIEASQDTLSQVHSESIDAQLLEEMIVQLTEEEKLVEADETLSVPSLYYSEVKSVQNLYRIEAHQTKLETIE
QSDLQIHIGEIEDVNNVNYAASQKEALETAINSKVMLLTGGPGTGKTTVIKGIVELYAEIHGLSLDYDDYNEDDYPVALA
APTGRAAKRLQESTGLEAMTIHRLIGWSQETKPEDVLENEINAKLIIIDEMSMVDTWLFHQFLNAVPIDAQVILVGDEDQ
LPSVGPGQVFKDLIDSKVVPRVNLTEVYRQQDGSSIIELAHKMKLGQPIDITQRFHDRSFIPCSADQIPDVVNKVVTSAV
KKGYDMSDIQVLAPMYRGSAGIKRLNKVLQDILNPKQEDTREIEFGDVVFRKGDKVLQLVNRPSDNIFNGDIGVIQGIFW
AKENELNKDVLVVDFDGNEITFTKQDMMELTHAYCTSIHKAQGSEFPIVIMPVVKQYYRMLQRPIIYTGLTRAKQSLVFL
GDSQAFDIGMQTYGQVRMTRMAQLLRDYFGTEMSETTNETENDIDTNEIIAEQNSKVIALSEETIFEIDPMIGMGNVTPY
SFANDK

Nucleotide

• Length: 2421 bp

>NTDB_id=176759 A4G25_RS01315 WP_047131822.1 250747..253167(+) (recD2) [Staphylococcus condimenti strain DSM 11674]
TTGAGCAACCCTACATTATTTGATTATTCAATGGTCAAAGGTACAGTTGAAGCTATTCTTTTTCAAAATAAAGAAAACTT
TTACACTGTATTAAAAGTAGATCCAATCGAGACAAATGAAGAATTTGATAGTATGCCGACCGTTGTAGGGTTCTTTCCTG
AAATTGCGGAAGGAGATGTTTATACTTTTAAAGGTCAAGCTGTCACTCACCCTCGATATGGCAAGCAATTAAAAGCTGAG
ACCTTTGAAAAAGAACTGCCGCAAACTAAAGATGCGATTGTAAGTTATCTCTCAAGTGATTTATTTAAAGGCATCGGGAA
AAAAACAGCAGAAAATATCGTCGACACACTTGGTGAAAATGCGATTAATAAAATTCTTGATGATGAACAAGTATTGGCAG
AAGTACCGCATCTGTCTAAGAAAAAGCAAAAACAAATTGCAGAACAAATTTACAGTAATCAAGAAGTTGAAAAAATCATG
ATTCGTCTGCATGATTTAGGTTTCGGTCCTAAATTATCGATGAATATTTACCAAGTTTACCAAGTTGAAACACTCACTGA
AATTGAGAAGAATCCGTATCAGCTTGTCTATGATGTTAAAGGGGTCGGTTTTAATAAAGCTGATACTTTAGCTAAGAATC
TTGGTATTGAATACAATGATCCTGAACGATTAAAAGCAGGATTATTATATACAATTGAGGAAGAATGTATTAAACAAGGA
CATACGTATTTGCCGAAAGATTATGTGATTGAAGCTTCACAAGATACTTTATCTCAAGTGCATAGCGAATCCATTGATGC
CCAATTGTTGGAAGAGATGATTGTACAGCTGACTGAAGAAGAAAAGTTGGTAGAAGCAGATGAAACACTTTCTGTACCAA
GTTTATATTATTCAGAAGTTAAAAGTGTACAAAATTTATATCGCATTGAAGCACATCAAACAAAACTAGAGACAATTGAA
CAATCAGACCTGCAGATACACATTGGAGAAATTGAAGATGTCAATAATGTAAATTATGCTGCATCTCAAAAAGAAGCACT
TGAAACTGCTATAAATTCTAAAGTCATGCTGTTAACAGGCGGGCCTGGTACAGGTAAAACAACTGTGATTAAAGGTATTG
TAGAATTATATGCTGAAATCCATGGTCTGTCTCTTGATTATGATGATTATAACGAAGATGATTATCCTGTCGCTTTAGCA
GCACCAACAGGCCGAGCTGCTAAAAGATTGCAAGAATCTACGGGATTAGAAGCTATGACGATACATCGATTAATCGGTTG
GAGCCAAGAAACAAAACCAGAAGACGTTCTTGAAAATGAAATCAACGCTAAGCTGATTATTATCGACGAAATGTCTATGG
TCGACACATGGCTGTTCCACCAATTTTTAAATGCCGTTCCAATTGATGCGCAAGTCATCTTAGTAGGAGATGAAGATCAA
TTACCTTCAGTAGGTCCAGGGCAAGTATTTAAAGATTTAATTGATTCTAAAGTAGTGCCGCGTGTGAATCTAACTGAAGT
TTATCGCCAACAAGACGGTTCTAGTATTATTGAATTAGCACATAAAATGAAACTGGGACAGCCAATTGATATTACACAAC
GATTTCATGATCGCAGTTTTATACCATGCAGTGCCGATCAAATACCGGATGTAGTTAATAAAGTGGTAACCTCAGCTGTG
AAAAAAGGTTATGATATGAGTGATATTCAAGTACTTGCACCGATGTACAGAGGCAGTGCTGGTATTAAGCGTCTGAATAA
AGTACTTCAAGACATTTTAAATCCTAAACAAGAAGATACACGTGAAATCGAATTCGGAGATGTTGTTTTTCGAAAAGGCG
ATAAAGTACTGCAATTAGTTAATCGACCAAGCGATAATATTTTTAACGGAGATATTGGCGTCATTCAAGGTATCTTTTGG
GCAAAAGAAAATGAATTGAATAAAGATGTGTTAGTCGTTGATTTTGATGGAAATGAAATTACATTTACCAAACAAGATAT
GATGGAACTTACGCATGCTTATTGTACTTCCATTCATAAAGCGCAAGGTTCAGAGTTTCCAATTGTGATAATGCCGGTAG
TCAAACAATATTACCGCATGCTGCAAAGACCGATTATTTATACAGGATTAACGCGAGCTAAACAATCTTTAGTTTTTCTA
GGCGACAGTCAAGCCTTTGATATTGGTATGCAAACCTATGGTCAAGTGCGGATGACACGTATGGCACAGCTATTGCGCGA
TTATTTCGGTACAGAAATGAGCGAAACAACAAATGAAACAGAAAATGATATAGATACAAACGAGATAATTGCAGAACAAA
ATTCAAAAGTCATTGCGTTATCAGAAGAAACAATATTTGAAATTGACCCGATGATTGGAATGGGTAATGTCACACCTTAT
AGTTTCGCGAATGATAAATAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (339-544)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (585-655)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (672-719)

3D structure

• AlphaFold DB: A0A143P8G5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	51.365	100	0.514