Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   BTR42_RS07045 Genome accession   NZ_CP018822
Coordinates   1392422..1394194 (-) Length   590 a.a.
NCBI ID   WP_009854392.1    Uniprot ID   -
Organism   Streptococcus gallolyticus subsp. gallolyticus DSM 16831     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1387422..1399194
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BTR42_RS07015 (BTR42_06710) - 1387794..1388420 (-) 627 WP_009854386.1 ABC transporter permease -
  BTR42_RS07020 (BTR42_06715) - 1388413..1389186 (-) 774 WP_009854387.1 ABC transporter ATP-binding protein -
  BTR42_RS07025 (BTR42_06720) - 1389199..1390119 (-) 921 WP_009854388.1 glycine betaine ABC transporter substrate-binding protein -
  BTR42_RS07030 (BTR42_06725) - 1390109..1390744 (-) 636 WP_009854389.1 ABC transporter permease -
  BTR42_RS07035 (BTR42_06730) - 1390734..1391186 (-) 453 WP_009854390.1 MarR family winged helix-turn-helix transcriptional regulator -
  BTR42_RS07040 (BTR42_06735) - 1391176..1392153 (-) 978 WP_009854391.1 zinc-binding dehydrogenase -
  BTR42_RS07045 (BTR42_06740) rcrQ 1392422..1394194 (-) 1773 WP_009854392.1 ABC transporter ATP-binding protein Regulator
  BTR42_RS07050 (BTR42_06745) rcrP 1394184..1395998 (-) 1815 WP_009854393.1 ABC transporter ATP-binding protein Regulator
  BTR42_RS07055 (BTR42_06750) rcrR 1396002..1396442 (-) 441 WP_012962070.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  BTR42_RS07060 (BTR42_06755) - 1396617..1397027 (-) 411 WP_009854395.1 peptide deformylase -
  BTR42_RS07065 (BTR42_06760) - 1397024..1397533 (-) 510 WP_077496988.1 GNAT family N-acetyltransferase -
  BTR42_RS07070 (BTR42_06765) gdhA 1397800..1399149 (-) 1350 WP_009854398.1 NADP-specific glutamate dehydrogenase -

Sequence

Protein


Download         Length: 590 a.a.        Molecular weight: 65251.34 Da        Isoelectric Point: 5.1292

>NTDB_id=176209 BTR42_RS07045 WP_009854392.1 1392422..1394194(-) (rcrQ) [Streptococcus gallolyticus subsp. gallolyticus DSM 16831]
MENKKKTSFYGRMKPYIKGFQLPFLLAVIGAIVSATVTVIGPDKLKEITNTITKGLTPTATGMIPGIDLDKVGEIALTLA
ILYVISAVVGYIQSFTVATIVQRFSQRLRKAIQTKIDKVPLNYFDSHSQGDTLSRVTNDVDLLGQSLNQSLGTLVTSTML
LIGSIFMMFHSNVSMALTAIGSVLIGFVLVMVIMGSSQPLFKRQQNNLAAINGYVEEIYSGHNVVTSYNAAGETSETFKK
LNTNLYKSMWQSQFLSGIMMPLMIFVGNFGYVMVCVVGAVKVINGDITMGDVVAFMTYVRIFSQPLSQIAQAFTQMQSAT
AAMSRVFEFLEEDEMEDESDKERQLSDVNGEVAFDNVFFGYSKDKTIIHDFSAVAKPGQKVAIVGPTGAGKTTIVNLLMK
FYEIDKGRITIDGVDTRLMTREEVHDQFSMVLQDTWLFEGTIKENLIYNQENITDEQVIAAAKAVGVHHFIMTLPKGYDT
YLDDSVTLSIGQKQLLTIARALLKDSPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMKD
GNIIEQGNHDDLMQQGGFYADLYNSQFEVA

Nucleotide


Download         Length: 1773 bp        

>NTDB_id=176209 BTR42_RS07045 WP_009854392.1 1392422..1394194(-) (rcrQ) [Streptococcus gallolyticus subsp. gallolyticus DSM 16831]
ATGGAAAATAAGAAAAAAACATCTTTCTATGGCAGAATGAAGCCCTACATTAAAGGTTTCCAGCTTCCATTTCTTCTTGC
AGTGATTGGAGCAATTGTTTCTGCGACGGTTACGGTTATTGGACCTGATAAATTAAAAGAAATCACCAATACAATCACCA
AAGGTTTGACACCAACGGCGACTGGTATGATTCCAGGAATCGACTTGGATAAAGTTGGTGAAATTGCATTAACTTTGGCA
ATTTTATACGTTATTTCAGCAGTAGTTGGTTATATTCAAAGCTTTACCGTAGCGACTATCGTTCAACGTTTTTCACAACG
TTTACGTAAAGCTATTCAGACCAAAATTGACAAGGTTCCATTGAATTACTTTGATAGTCATTCGCAAGGGGACACCCTTT
CTCGTGTGACAAATGACGTTGACTTGCTTGGTCAATCGCTTAACCAAAGTTTGGGAACTTTGGTGACATCAACCATGTTA
TTGATTGGTTCAATTTTCATGATGTTCCATTCAAATGTCAGCATGGCTTTAACAGCGATTGGGTCTGTTCTGATTGGTTT
TGTTTTGGTTATGGTTATCATGGGCTCATCACAACCATTGTTCAAACGCCAACAAAATAACTTGGCTGCGATTAACGGTT
ATGTTGAAGAAATTTACTCTGGTCATAATGTGGTAACAAGTTATAACGCTGCTGGTGAAACAAGCGAAACCTTTAAAAAA
TTAAACACCAATCTTTATAAATCAATGTGGCAATCACAGTTCTTGTCAGGTATTATGATGCCGCTTATGATTTTCGTTGG
GAACTTTGGGTATGTTATGGTCTGTGTGGTTGGTGCCGTTAAAGTTATCAATGGTGATATTACCATGGGTGACGTGGTTG
CCTTTATGACTTATGTTCGTATCTTCTCACAACCATTGTCACAAATTGCGCAAGCTTTCACACAAATGCAATCAGCAACA
GCTGCCATGAGTCGTGTCTTTGAATTCCTTGAAGAAGATGAAATGGAAGACGAGTCTGACAAGGAACGTCAACTTAGTGA
TGTTAATGGTGAAGTTGCCTTTGATAATGTTTTCTTTGGTTATTCTAAGGATAAAACAATTATCCATGATTTCTCAGCTG
TGGCGAAACCTGGTCAGAAAGTTGCCATTGTTGGACCAACAGGTGCTGGTAAAACAACCATTGTTAACCTGCTCATGAAA
TTCTATGAAATCGATAAAGGTCGAATCACTATTGATGGTGTGGATACACGTTTGATGACACGTGAAGAAGTGCATGACCA
ATTCTCAATGGTGCTTCAAGATACGTGGTTGTTTGAAGGAACAATCAAAGAAAACTTGATTTACAATCAAGAAAATATTA
CAGATGAACAAGTTATTGCAGCGGCTAAGGCTGTTGGTGTTCATCACTTTATCATGACACTTCCAAAAGGTTATGACACT
TATCTTGATGATTCTGTAACGCTTTCAATTGGTCAAAAACAACTCTTGACGATTGCGCGTGCTCTTCTGAAAGATTCACC
GCTCCTTATTTTGGACGAAGCAACGTCATCAGTTGATACACGTACTGAAGAATTGATTCAAAAAGCCATGGATAAATTGA
TGGAAGGTCGTACATCATTTGTTATCGCTCACCGTTTGTCAACGATTAGAAACGCTGACCTTATCCTTGTGATGAAAGAT
GGTAACATCATCGAACAAGGCAATCACGATGATTTGATGCAACAAGGCGGCTTCTATGCTGACCTCTACAATTCACAATT
TGAAGTAGCTTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(370-516)

ABC transporter transmembrane region (ABC_membrane)

(25-306)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

73.649

100

0.739