Detailed information NTG0174437

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: A1140_RS05990
• Genome accession: NZ_CP014834
• Coordinates: 1241109..1243505 (-)
• Length: 798 a.a.
• NCBI ID: WP_116254033.1
• Uniprot ID: -
• Organism: Staphylococcus felis strain BN1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1236109..1248505

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A1140_RS05970 (A1140_05870)	-	1237038..1237352 (-)	315	WP_103209980.1	DUF1292 domain-containing protein	-
A1140_RS05975 (A1140_05875)	ruvX	1237366..1237794 (-)	429	WP_103209982.1	Holliday junction resolvase RuvX	-
A1140_RS05980 (A1140_05880)	-	1237787..1238059 (-)	273	WP_103209984.1	IreB family regulatory phosphoprotein	-
A1140_RS05985 (A1140_05885)	alaS	1238232..1240862 (-)	2631	WP_349420615.1	alanine--tRNA ligase	-
A1140_RS05990 (A1140_05890)	recD2	1241109..1243505 (-)	2397	WP_116254033.1	ATP-dependent RecD-like DNA helicase	Machinery gene
A1140_RS05995 (A1140_05895)	-	1243510..1244184 (-)	675	WP_116094768.1	tetratricopeptide repeat protein	-
A1140_RS06000 (A1140_05900)	mnmA	1244237..1245349 (-)	1113	WP_349420616.1	tRNA 2-thiouridine(34) synthase MnmA	-
A1140_RS06005 (A1140_05905)	-	1245346..1246491 (-)	1146	WP_115871316.1	cysteine desulfurase family protein	-
A1140_RS06010 (A1140_05910)	-	1246826..1247788 (+)	963	WP_232618955.1	LLM class flavin-dependent oxidoreductase	-
A1140_RS06015	-	1247965..1248120 (-)	156	WP_167388997.1	hypothetical protein	-
A1140_RS06020 (A1140_05915)	-	1248120..1248320 (-)	201	WP_103209995.1	CsbD family protein	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 90456.07 Da
• Isoelectric Point: 4.6227

>NTDB_id=174437 A1140_RS05990 WP_116254033.1 1241109..1243505(-) (recD2) [Staphylococcus felis strain BN1]
MENPTLLDSTYIKGNIEFILFQNSENFYTVLKVEVLESNGDFGDMATVVGFFPNIVEDETYIFHGHIVLHPRYGQQLKAE
TFQKEIPQTKDAVIAYLSSDLFKGIGKKTAESIVNTIGEDAITQILRDESVLSDVPKLSKAKQQQIAELITQNRESEQIM
IRLNELGFGAKLSMDIYQYYKADTIRIVENNPYQLVFDIRGVGFQKADQLALQLGIAPTNQDRLKAGLLYLIEEICIKQG
HTYLPESTLINEAVQLLSKNQNITIETTQIKETLTFLYEEKKLINFEENVSLPSLYYSELKSTQNLFKIMSNVEMISKFD
DSDIQLQIGQIEEQNHVYYAPSQKDALENAMKHKVMLLTGGPGTGKTTVIKGIVQLYAELHGLSLDYNDYEEDEFPISLA
APTGRASKRLYESTGLEATTIHRLIGWSQETKPDDILDYEISAKLIIIDEMSMVDTWLFHQFLSAVPLDAQVILVGDEDQ
LPSVGPGQVFKDLIDTGVLPRINLTEVFRQQDGSSIIELAHRMKTGLNVDITERYHDRSFIPCHAEQIPSVVDKVVKNAV
KKGYTMSDIQVLAPMYRGSAGIKKLNEVLQNILNPKHDDEHREIDFGEVKFRKGDKVLQLVNRPNDNIFNGDIGEIVGIF
WAKENDLNKDVVVVDFEGNEITFIRSDLIELTHAYCTSIHKAQGSEFPIVIMPIVKQYFRMLQKPILYTGLTRAKQSLVF
LGEAEAFNIGLTTEGQTRLTYLATFLRQYFNDTDDIRESETSNDHQSIVLTEDTISKIDPMINMAKVTPYDFLEIDKV

Nucleotide

• Length: 2397 bp

>NTDB_id=174437 A1140_RS05990 WP_116254033.1 1241109..1243505(-) (recD2) [Staphylococcus felis strain BN1]
GTGGAAAACCCAACATTATTAGATAGCACATATATCAAAGGGAATATCGAATTTATTTTATTTCAAAATAGCGAAAACTT
TTACACTGTTTTAAAAGTGGAAGTTCTTGAGTCAAATGGCGATTTCGGTGATATGGCTACGGTTGTTGGGTTTTTTCCAA
ACATCGTGGAAGACGAAACGTATATATTTCATGGTCATATCGTATTACATCCTCGATACGGCCAACAACTTAAAGCTGAG
ACATTTCAAAAGGAAATCCCTCAAACAAAAGATGCTGTTATTGCTTATTTATCGAGCGATTTATTCAAAGGGATAGGTAA
AAAAACAGCAGAATCAATCGTAAATACAATTGGTGAAGACGCTATTACCCAAATATTAAGAGATGAATCTGTTCTATCGG
ATGTTCCTAAATTATCTAAAGCAAAGCAACAACAAATTGCTGAACTGATTACCCAAAATCGGGAAAGCGAACAAATAATG
ATTCGCCTAAATGAACTAGGCTTCGGTGCAAAGTTATCAATGGATATTTATCAATATTATAAAGCTGACACCATCCGAAT
CGTTGAAAATAATCCGTATCAATTGGTTTTTGATATCCGAGGTGTAGGGTTTCAAAAAGCTGATCAACTTGCATTACAAC
TTGGTATAGCACCAACGAATCAAGATCGTTTGAAAGCTGGATTGCTTTATTTAATTGAAGAAATATGTATTAAACAAGGT
CATACATATCTACCTGAATCAACTCTTATCAATGAAGCGGTACAGTTATTGTCCAAAAATCAAAATATAACGATTGAAAC
AACACAAATTAAAGAAACTTTGACATTCTTATACGAAGAAAAAAAGTTAATCAACTTTGAAGAAAATGTGTCGTTACCAA
GTCTCTATTATTCTGAACTAAAAAGTACTCAAAACTTATTTAAAATTATGAGCAATGTTGAAATGATTTCAAAATTTGAC
GATTCGGACATTCAATTACAAATTGGTCAAATCGAGGAACAAAATCATGTATACTATGCCCCTTCTCAAAAAGATGCATT
AGAAAATGCAATGAAACACAAAGTCATGTTATTAACAGGTGGGCCAGGTACAGGAAAGACTACTGTAATTAAAGGGATTG
TTCAATTATATGCAGAATTACACGGTTTATCTTTAGATTATAATGATTATGAAGAGGATGAGTTTCCGATTTCACTTGCT
GCACCGACTGGCCGTGCCTCTAAAAGACTTTATGAATCTACAGGTCTTGAAGCAACTACCATTCACCGCCTTATTGGTTG
GAGTCAAGAAACAAAGCCAGACGATATTTTAGATTATGAAATCAGTGCAAAACTTATTATTATTGATGAGATGTCAATGG
TAGATACATGGTTGTTTCATCAATTTTTATCAGCTGTGCCATTAGATGCTCAAGTGATACTTGTAGGTGATGAAGATCAA
CTCCCATCAGTTGGTCCTGGTCAAGTGTTTAAAGATTTAATTGATACAGGTGTACTACCTAGAATTAACTTAACTGAAGT
CTTCAGACAACAAGATGGTTCGAGCATTATTGAATTAGCACATCGTATGAAAACAGGACTTAACGTTGACATTACTGAAA
GATATCATGATCGCTCGTTTATTCCATGTCATGCTGAACAAATTCCTAGTGTTGTTGATAAAGTTGTAAAAAATGCTGTC
AAAAAAGGATATACGATGTCAGATATTCAGGTGTTAGCTCCGATGTACCGTGGTAGTGCTGGGATAAAAAAATTAAATGA
AGTTTTACAAAATATATTAAACCCAAAACACGATGATGAACATCGTGAAATTGATTTTGGTGAAGTAAAGTTTCGTAAAG
GGGACAAAGTGTTACAACTTGTCAACAGGCCAAACGACAATATATTCAATGGAGATATTGGAGAGATTGTTGGTATTTTT
TGGGCAAAAGAAAATGATTTGAATAAAGATGTAGTCGTAGTAGATTTTGAAGGAAATGAAATTACATTCATACGATCAGA
TTTAATTGAACTGACACATGCTTATTGCACATCAATTCATAAAGCACAAGGATCAGAATTTCCAATTGTGATTATGCCTA
TAGTTAAGCAGTATTTTCGAATGTTACAAAAACCCATACTTTACACTGGTCTTACACGCGCAAAGCAATCGCTTGTCTTT
TTAGGTGAAGCGGAGGCGTTTAACATAGGATTAACGACAGAAGGACAAACAAGGTTAACGTACTTGGCAACGTTTTTACG
ACAGTATTTTAACGATACGGATGATATACGTGAATCCGAAACATCAAATGATCATCAATCTATTGTTTTAACAGAAGACA
CTATTTCTAAGATTGATCCTATGATTAATATGGCAAAGGTAACACCATATGATTTTTTAGAAATTGACAAAGTTTAG

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (339-545)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (585-656)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (673-720)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	49.686	99.624	0.495