Detailed information NTG0173667

Bioinformatically predicted

Overview

• Name: recD/recD2/recDB
• Type: Machinery gene
• Locus tag: BSR19_RS09170
• Genome accession: NZ_CP018187
• Coordinates: 2017020..2019524 (+)
• Length: 834 a.a.
• NCBI ID: WP_060972422.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain ICDC2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2012020..2024524

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSR19_RS09150 (BSR19_09285)	-	2014257..2014799 (-)	543	WP_070654666.1	CvpA family protein	-
BSR19_RS09155 (BSR19_09290)	zapA	2014796..2015110 (-)	315	WP_004183554.1	cell division protein ZapA	-
BSR19_RS09160 (BSR19_09295)	rnhC	2015427..2016317 (+)	891	WP_060972421.1	ribonuclease HIII	-
BSR19_RS09165 (BSR19_09300)	lepB	2016336..2016959 (+)	624	WP_013991198.1	signal peptidase I	-
BSR19_RS09170 (BSR19_09305)	recD/recD2/recDB	2017020..2019524 (+)	2505	WP_060972422.1	ATP-dependent RecD-like DNA helicase	Machinery gene
BSR19_RS09180 (BSR19_09310)	-	2019614..2020549 (+)	936	WP_156246646.1	IS30 family transposase	-
BSR19_RS09185 (BSR19_09315)	-	2020637..2020963 (-)	327	WP_060973388.1	AzlD domain-containing protein	-
BSR19_RS09190 (BSR19_09320)	-	2020950..2021642 (-)	693	WP_156247034.1	AzlC family ABC transporter permease	-
BSR19_RS09195 (BSR19_09325)	tsaD	2021694..2022707 (-)	1014	WP_060973389.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
BSR19_RS09200 (BSR19_09330)	rimI	2022707..2023162 (-)	456	WP_060973390.1	ribosomal protein S18-alanine N-acetyltransferase	-
BSR19_RS09205 (BSR19_09335)	tsaB	2023122..2023808 (-)	687	WP_060973391.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
BSR19_RS09210 (BSR19_09340)	-	2024069..2024299 (+)	231	WP_002884752.1	DNA-dependent RNA polymerase subunit epsilon	-

Sequence

Protein

• Length: 834 a.a.
• Molecular weight: 93757.03 Da
• Isoelectric Point: 4.4514

>NTDB_id=173667 BSR19_RS09170 WP_060972422.1 2017020..2019524(+) (recD/recD2/recDB) [Streptococcus salivarius strain ICDC2]
MQEFYFSGTIERVIFENTSNFFRILLLEIDETDSDFEDYEIIVTGTMGDVMEGEDYTFWGQLTNHPKYGEQLQMTRYERS
KPSASGLIKYFASDNFKGIGKKTAERIVEIYGEDPIDKILEDPSELEQIPNLSKVNREAFVAKLKINYGAEQILSKLSSY
GLTPKAASQIFNQYKEESLNLIEEHPYLLVEEIQGIGFKMADQLAERLGIASDAPERLRAALIHCLLEASMEEGDTYIEA
KALLERTIILLEGARPIELDPALVANQLTNLIQEDKVQNVETKIFDNTLYFAEQGIYTHLTRIMKDQPDVSSEDKILDSL
EGVEEELGITYDKVQKDAIIKALQSKVFILTGGPGTGKTTVINGIIKTYADLHGLDLKKSDLPIILAAPTGRAARRMNEL
TQLPSATIHRHLGLNSEDDFKTLEDYLDCDLIIIDEFSMVDTWLANQLFESISDSTQVIIVGDQDQLPSVGPGQVLADLL
QIDNLPKVSLTKIFRQSEDSTIVTLASQMRQGQLPADFTEKKADRSYFEAKANHIPQMVPKIVSAAIKSGIAAQDVQILA
PMYRGQAGINNLNTIMQDLLNPQEKANQFAFNDIFFRKNDKILHLVNDTELNVFNGDIGVITDLIPGKYTESKQDEIYMS
FDGNEVIYPRNEWNKITLAYAMSIHKSQGSEFPVVILPITRQSGRMLQRNLIYTAITRAKSKLVMLGEIAAFDYAVHNEG
AKRNTYLIQRFEQTYTQAVDKSVEKIVTNEATDASNQTKKENNGSSEPLENKDISGNINPSPTLINTYSQPVDKSVNKPV
QTEENYRLTEDNWSTIDPMIGLSEDDIAAFFNNR

Nucleotide

• Length: 2505 bp

>NTDB_id=173667 BSR19_RS09170 WP_060972422.1 2017020..2019524(+) (recD/recD2/recDB) [Streptococcus salivarius strain ICDC2]
ATGCAAGAATTTTATTTTTCAGGAACTATCGAACGCGTCATTTTCGAAAACACTAGTAATTTTTTTCGTATCTTACTCTT
AGAGATTGACGAAACGGACAGTGATTTTGAAGACTACGAAATCATTGTCACAGGAACTATGGGGGATGTCATGGAGGGTG
AAGACTATACCTTCTGGGGCCAACTAACCAATCACCCTAAATATGGGGAACAGCTACAAATGACCCGCTACGAGCGTTCA
AAACCTTCTGCCAGCGGTCTTATCAAATATTTTGCCAGCGACAATTTCAAAGGAATCGGTAAGAAAACGGCCGAGCGTAT
TGTCGAAATTTACGGAGAAGACCCTATTGACAAGATTCTCGAGGATCCTAGCGAGTTAGAGCAGATTCCCAACCTATCCA
AGGTCAATCGAGAAGCCTTTGTTGCTAAGTTAAAAATCAATTATGGAGCCGAGCAAATCCTGTCCAAACTTTCTAGCTAT
GGCCTCACACCAAAGGCCGCCTCACAAATTTTCAACCAATATAAGGAAGAGTCACTAAATCTTATTGAGGAACACCCTTA
TCTATTAGTAGAGGAGATTCAAGGAATCGGTTTTAAAATGGCCGACCAACTAGCTGAACGTCTTGGAATTGCTAGTGATG
CCCCTGAGCGTTTACGAGCAGCCTTGATTCATTGTCTACTAGAAGCCAGTATGGAAGAAGGCGATACCTACATAGAAGCC
AAAGCCTTGCTTGAACGGACCATCATTCTTTTGGAAGGTGCTCGTCCGATTGAACTTGACCCCGCCTTGGTCGCTAACCA
ATTAACCAATCTTATCCAAGAGGATAAGGTGCAAAATGTAGAGACTAAAATCTTTGATAATACCCTATATTTTGCGGAAC
AGGGCATCTATACCCACCTAACTCGTATCATGAAGGACCAACCTGACGTCAGCTCTGAAGACAAAATCTTAGACAGCCTT
GAAGGGGTGGAAGAGGAGCTTGGTATTACTTATGATAAGGTTCAAAAAGATGCCATTATCAAAGCCCTACAAAGTAAGGT
CTTCATCCTGACAGGTGGTCCCGGAACAGGGAAAACCACTGTTATTAACGGCATTATTAAAACCTATGCTGACCTTCATG
GCCTAGATCTCAAAAAGTCTGATTTACCTATTATTTTAGCAGCACCAACGGGACGGGCTGCTCGTCGGATGAACGAACTC
ACCCAACTCCCTAGCGCCACTATTCATAGACATTTAGGCCTCAATAGCGAGGACGATTTTAAGACCTTAGAGGACTATCT
CGATTGCGATTTGATTATCATCGATGAGTTCTCTATGGTTGATACTTGGTTGGCCAATCAACTCTTTGAAAGTATCTCTG
ATTCAACCCAAGTTATCATTGTGGGTGACCAAGACCAACTACCTTCCGTAGGCCCTGGCCAAGTCTTGGCTGACCTTTTG
CAGATTGATAACTTGCCTAAGGTTTCCCTAACCAAAATTTTCAGACAATCCGAGGATTCCACTATCGTTACCCTAGCTAG
CCAGATGCGCCAAGGCCAACTACCCGCTGATTTCACAGAGAAAAAGGCTGACCGCTCTTACTTTGAGGCCAAGGCCAACC
ATATTCCACAGATGGTTCCTAAAATCGTCTCTGCTGCGATAAAGAGTGGGATTGCAGCTCAGGATGTTCAGATTCTAGCC
CCCATGTACCGAGGACAGGCTGGTATTAACAATCTCAATACCATTATGCAAGACCTACTTAATCCCCAAGAAAAGGCCAA
TCAGTTCGCCTTTAATGATATCTTCTTCCGCAAGAACGACAAGATTCTCCATCTGGTCAACGATACAGAACTCAATGTCT
TCAATGGCGACATCGGAGTCATTACTGATCTCATTCCTGGTAAATATACTGAAAGCAAACAGGACGAAATTTACATGTCC
TTCGACGGCAATGAGGTTATCTATCCTCGTAACGAATGGAATAAGATTACTCTGGCCTATGCTATGTCAATCCACAAATC
CCAAGGGAGTGAGTTCCCAGTCGTTATCCTTCCCATCACACGCCAAAGTGGGCGTATGCTACAACGTAATCTCATTTACA
CCGCAATCACACGCGCCAAGAGTAAACTAGTCATGCTAGGGGAAATCGCAGCCTTCGATTATGCTGTTCACAACGAGGGG
GCTAAACGAAATACTTATCTCATCCAACGTTTTGAACAAACTTATACACAAGCTGTTGATAAGTCTGTCGAGAAGATTGT
TACAAACGAGGCAACAGACGCATCCAATCAAACCAAAAAGGAAAACAACGGATCCTCAGAACCCCTTGAAAACAAAGATA
TTTCGGGAAATATAAATCCATCTCCAACTCTTATTAACACTTATTCACAGCCTGTGGATAAGTCTGTTAACAAACCTGTG
CAAACCGAAGAAAACTATCGTTTAACGGAAGATAATTGGTCAACTATAGATCCAATGATTGGTCTCAGTGAAGACGATAT
TGCTGCCTTTTTTAACAATAGATAA

Domains

Predicted by InterProScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (659-705)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (572-638)

• AAA domain (AAA_30) (331-523)

• Helix-hairpin-helix containing domain (HHH_RecD2) (148-237)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD/recD2/recDB	Bacillus subtilis subsp. subtilis str. 168	45.114	89.568	0.404