Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   BSR19_RS07375 Genome accession   NZ_CP018187
Coordinates   1636333..1638201 (-) Length   622 a.a.
NCBI ID   WP_156246924.1    Uniprot ID   -
Organism   Streptococcus salivarius strain ICDC2     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1631333..1643201
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSR19_RS07365 (BSR19_07480) - 1633192..1634280 (-) 1089 WP_156246922.1 hypothetical protein -
  BSR19_RS07370 (BSR19_07485) - 1634715..1636238 (+) 1524 WP_156246923.1 ATP-binding cassette domain-containing protein -
  BSR19_RS07375 (BSR19_07490) rcrQ 1636333..1638201 (-) 1869 WP_156246924.1 ABC transporter ATP-binding protein Regulator
  BSR19_RS07380 (BSR19_07495) - 1638191..1639936 (-) 1746 WP_156246925.1 ABC transporter ATP-binding protein -
  BSR19_RS07385 (BSR19_07500) gshAB 1640634..1642892 (+) 2259 WP_156246926.1 bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB -

Sequence

Protein


Download         Length: 622 a.a.        Molecular weight: 68776.17 Da        Isoelectric Point: 4.9887

>NTDB_id=173641 BSR19_RS07375 WP_156246924.1 1636333..1638201(-) (rcrQ) [Streptococcus salivarius strain ICDC2]
MQNKKKANWGSLARLLRFLWQDYKLSLSIAFVLIVVASLATVNLTASIQSLVDVYIQPLLKSGSHDFGPLLRFLTSVGVF
CLIGVIANYVASLLMATISQDSLRSLRNQLFARMQKLPIRYFDTHQHGDIMSIYTNDIDALRQAVEQSIPQLLQTAITLI
GVTVTMLTVSPLLFIVVLIMVGIMFMVIKNVSAKSGRYFGEQQKNLGIENGFIEEMMSGQKVVKAFVHEEESMADFDKIN
EQLFESSYLANRYANVLMPILGNLGNVSFVLTALVGGVFALNGVGSLTIGGLMAFLQLNRSFNGPITQVSQQLNFVLMAL
AGADRIFDLLDEPEEVDQGKVTLVNYELVDGQMVVTDKKTNLWAWKHPRPNGDYELVELVGNVVFQDVDFSYDGKKQILH
DVNLYADKGQKVAFVGATGAGKTTITNLINRFYDIQSGVITYDGIDVKLIEKDSLRRSLGIVLQDTHLFTGTIAENIAYG
RADATREEILEAARIANVDSFVQHLDNGYDTVLTDDGAGLSNGQRQLIAIARAALANAPVLILDEATSSIDSRTEKMVQE
GMDRLMEGRTVFVIAHRLSTIVNSDVIMVMDHGRIIERGDHDSLMEQGGTYYRLYTGGLEID

Nucleotide


Download         Length: 1869 bp        

>NTDB_id=173641 BSR19_RS07375 WP_156246924.1 1636333..1638201(-) (rcrQ) [Streptococcus salivarius strain ICDC2]
ATGCAGAATAAGAAAAAAGCTAATTGGGGCTCTCTAGCACGTCTTCTACGCTTTTTGTGGCAAGACTACAAACTTTCGCT
TAGTATTGCTTTTGTCCTCATTGTTGTTGCTTCTTTGGCAACAGTCAATTTGACGGCTTCGATTCAGTCCTTGGTTGACG
TTTACATTCAACCTTTGCTCAAATCTGGTAGCCATGACTTTGGACCATTGTTACGTTTCTTGACTTCAGTTGGGGTCTTT
TGTCTTATCGGTGTGATTGCCAACTATGTGGCCTCCCTCCTCATGGCGACGATTTCGCAAGATTCTCTGCGTTCCCTTCG
TAATCAGCTTTTTGCTCGTATGCAAAAGCTTCCGATTCGCTACTTTGACACTCACCAACACGGGGACATCATGTCTATCT
ATACCAATGACATCGATGCCCTTCGTCAGGCTGTTGAGCAGTCTATTCCGCAGTTGTTACAAACGGCCATTACCCTTATC
GGGGTGACTGTGACCATGCTCACGGTTAGCCCTCTCCTCTTTATCGTGGTTCTAATCATGGTAGGCATCATGTTTATGGT
CATCAAAAATGTATCAGCCAAATCAGGTCGTTACTTCGGTGAACAACAAAAGAACCTAGGGATTGAGAATGGTTTTATCG
AAGAAATGATGTCAGGTCAAAAGGTAGTCAAGGCCTTCGTCCACGAAGAAGAAAGCATGGCTGACTTTGACAAGATTAAT
GAACAACTCTTTGAATCGTCATATTTAGCCAATCGCTATGCCAATGTTCTCATGCCAATTCTTGGGAACTTAGGAAATGT
TTCCTTTGTTTTGACTGCCTTGGTCGGTGGGGTATTTGCTCTAAATGGTGTCGGTAGCTTAACTATCGGTGGTCTCATGG
CCTTCCTTCAATTGAACCGTTCCTTCAATGGTCCTATTACTCAGGTGTCTCAACAACTTAACTTTGTCCTTATGGCACTT
GCTGGTGCAGACCGTATCTTTGACCTTTTGGATGAACCAGAAGAAGTTGACCAAGGTAAGGTCACTTTGGTCAACTACGA
ATTGGTAGATGGTCAAATGGTTGTGACAGACAAGAAAACCAATCTTTGGGCTTGGAAACACCCACGTCCAAATGGCGACT
ATGAATTGGTCGAATTGGTCGGAAATGTGGTCTTCCAAGATGTTGATTTCTCTTATGATGGTAAGAAACAAATCCTTCAC
GACGTTAACCTCTATGCGGATAAGGGGCAAAAGGTTGCCTTTGTTGGTGCGACAGGTGCTGGTAAGACGACAATTACCAA
CTTGATTAATCGTTTCTACGACATCCAATCTGGTGTGATTACTTATGATGGTATCGATGTGAAGCTGATTGAAAAAGATT
CTCTTCGCCGATCACTTGGTATCGTGCTTCAGGATACCCATCTCTTCACAGGGACTATCGCTGAAAATATTGCCTACGGC
CGTGCGGATGCGACTCGTGAAGAAATTCTTGAGGCTGCTCGTATTGCTAACGTGGATTCCTTTGTGCAACATCTGGACAA
TGGTTACGACACTGTTCTTACAGACGATGGTGCAGGCTTGTCTAATGGTCAACGACAGCTGATTGCCATTGCGCGTGCTG
CCCTTGCTAATGCACCGGTTCTCATCCTTGATGAAGCGACGTCTTCGATTGACTCTCGTACCGAAAAAATGGTGCAAGAA
GGGATGGACCGACTTATGGAAGGACGTACGGTCTTTGTTATCGCCCACCGTCTTTCAACCATCGTTAACTCTGACGTTAT
CATGGTTATGGACCATGGACGTATCATTGAACGTGGTGACCATGACAGCCTTATGGAGCAAGGTGGCACTTACTACCGAC
TCTATACTGGTGGTCTTGAAATTGATTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(399-548)

ABC transporter transmembrane region (ABC_membrane)

(29-305)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

37.236

98.875

0.368