Detailed information NTG0173556

Bioinformatically predicted

Overview

• Name: recD/recD2/recDB
• Type: Machinery gene
• Locus tag: BSR14_RS09050
• Genome accession: NZ_CP018186
• Coordinates: 1967775..1970279 (+)
• Length: 834 a.a.
• NCBI ID: WP_049527805.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain ICDC1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1962775..1975279

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSR14_RS09030 (BSR14_09135)	-	1964986..1965528 (-)	543	WP_002884677.1	CvpA family protein	-
BSR14_RS09035 (BSR14_09140)	zapA	1965525..1965839 (-)	315	WP_004183554.1	cell division protein ZapA	-
BSR14_RS09040 (BSR14_09145)	rnhC	1966155..1967045 (+)	891	WP_045771670.1	ribonuclease HIII	-
BSR14_RS09045 (BSR14_09150)	lepB	1967064..1967714 (+)	651	WP_049527808.1	signal peptidase I	-
BSR14_RS09050 (BSR14_09155)	recD/recD2/recDB	1967775..1970279 (+)	2505	WP_049527805.1	ATP-dependent RecD-like DNA helicase	Machinery gene
BSR14_RS09055 (BSR14_09160)	-	1970331..1970657 (-)	327	WP_049527803.1	AzlD domain-containing protein	-
BSR14_RS09060 (BSR14_09165)	-	1970644..1971336 (-)	693	WP_002884750.1	AzlC family ABC transporter permease	-
BSR14_RS09065 (BSR14_09170)	tsaD	1971388..1972401 (-)	1014	WP_049527802.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
BSR14_RS09070 (BSR14_09175)	rimI	1972401..1972856 (-)	456	WP_049527800.1	ribosomal protein S18-alanine N-acetyltransferase	-
BSR14_RS09075 (BSR14_09180)	tsaB	1972816..1973502 (-)	687	WP_049527796.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
BSR14_RS09080 (BSR14_09185)	-	1973763..1973993 (+)	231	WP_002884752.1	DNA-dependent RNA polymerase subunit epsilon	-

Sequence

Protein

• Length: 834 a.a.
• Molecular weight: 94154.39 Da
• Isoelectric Point: 4.3921

>NTDB_id=173556 BSR14_RS09050 WP_049527805.1 1967775..1970279(+) (recD/recD2/recDB) [Streptococcus salivarius strain ICDC1]
MQEFYFSGTIERVIFENASNFFRILLLEIDETDSDFEDYEIIVTGTMGDVMEGEDYTFWGQLTNHPKYGEQLQMTRYERS
KPSASGLIKYFASDNFKGIGKKTAERIVEIYGEDPIDKILEDPSKLEQIPNLSKVNREAFVAKLKINYGTEQILSKLSSY
GLTPKAASQIFNQYKEESLNLIEEHPYLLVEEVQGIGFKIADQLAERLGIASDAPERLRAALIHCLLEASMEEGDTYIEA
KALLERTIILLESARQIELDPALVAKELTNLIQEDKVQNIETKIFDNTLYFAEQGIYTHLTRIMKDQPDISAEDKIQASL
EEVEEELGITYDKVQKDAIINALQSKVFILTGGPGTGKTTVINGIIKTYTDLHGLDLKKSDLPIILAAPTGRAARRMNEL
TQLPSATIHRHLGLNSEDDFKTLEDYLDCDLIIIDEFSMVDTWLANQLFESISDSTQVIIVGDQDQLPSVGPGQVLADLL
QIDDLPKVSLTKIFRQSEDSTIVTLASQMRQGQLPADFTEKKADRSYFEANANHIPQMVPKIVSAAIKSGIAAQDVQILA
PMYRGQAGINNLNTIMQDLLNPQEKANQFAFNDIFFRKNDKILHLVNDTELNVFNGDIGIITDLIPDKYTESKQDEIYMS
FDGNEVIYPRNEWNKITLAYAMSIHKSQGSEFPVVILPITRQSGRMLQRNLIYTAITRAKSKLVMLGEIAAFDYAVRNEG
AKRNTYLIQRFEQTYTQAVDKSVEKIVKNEATEAPDQTKTKNNDPSETLENKDFSENINLSQDLVNTYSQPVDKSVNKPV
QTEENYRLTEENWATIDPMIGLSEDDIAAFFNNN

Nucleotide

• Length: 2505 bp

>NTDB_id=173556 BSR14_RS09050 WP_049527805.1 1967775..1970279(+) (recD/recD2/recDB) [Streptococcus salivarius strain ICDC1]
ATGCAAGAATTTTATTTTTCAGGAACTATCGAACGCGTCATTTTCGAAAACGCTAGTAATTTTTTCCGTATTCTACTCTT
AGAAATTGACGAAACAGACAGTGATTTTGAGGACTATGAAATCATTGTTACAGGAACCATGGGAGATGTCATGGAAGGTG
AAGATTATACCTTCTGGGGTCAGCTAACCAATCATCCCAAATATGGTGAACAACTCCAAATGACGCGCTACGAACGGTCA
AAACCTTCTGCCAGCGGTCTTATCAAGTATTTCGCCAGCGACAATTTTAAGGGGATTGGTAAGAAAACAGCTGAGCGTAT
TGTCGAGATTTATGGTGAAGACCCTATTGACAAGATTCTCGAGGATCCTAGCAAGTTAGAACAGATTCCTAACCTTTCAA
AGGTAAACCGAGAAGCCTTCGTTGCAAAGTTAAAAATTAACTATGGAACCGAGCAAATCTTGTCCAAACTTTCCAGCTAT
GGACTCACACCAAAAGCTGCCTCACAAATTTTCAACCAATATAAGGAAGAATCGCTCAATCTTATCGAAGAACACCCTTA
TCTCTTGGTAGAGGAAGTTCAAGGAATCGGATTTAAAATAGCTGACCAACTAGCCGAACGCCTAGGGATTGCTAGTGATG
CTCCTGAGCGTTTACGAGCTGCCTTGATTCATTGTCTGCTAGAAGCCAGTATGGAAGAAGGCGACACCTATATCGAAGCC
AAAGCCTTGCTTGAACGAACTATCATCCTTTTGGAAAGTGCTCGTCAGATTGAACTTGACCCCGCCTTAGTCGCGAAGGA
ATTAACCAATCTCATCCAAGAGGATAAAGTGCAAAATATAGAAACTAAAATCTTTGATAATACCCTTTATTTTGCGGAAC
AGGGCATCTATACCCACCTAACTCGTATCATGAAAGACCAACCTGACATCAGTGCAGAGGACAAAATCCAAGCAAGTCTT
GAAGAGGTGGAAGAGGAACTTGGTATTACTTATGATAAGGTTCAAAAAGATGCCATTATCAACGCCCTACAAAGCAAGGT
CTTCATCCTGACAGGTGGTCCCGGGACAGGTAAAACCACCGTTATTAACGGAATCATTAAAACTTATACCGACCTTCATG
GTCTAGATCTCAAAAAGTCTGATTTGCCTATTATTTTAGCGGCACCAACAGGACGGGCTGCTCGTCGGATGAACGAACTC
ACCCAACTCCCTAGCGCCACTATCCATAGACATTTGGGCCTCAATAGCGAGGACGATTTCAAGACCTTGGAGGACTATCT
CGATTGCGACTTGATTATCATCGATGAGTTTTCTATGGTTGATACTTGGTTGGCTAATCAACTTTTTGAAAGTATCTCTG
ATTCAACCCAAGTCATCATTGTGGGTGACCAAGACCAACTGCCTTCCGTAGGCCCTGGCCAGGTCTTGGCTGACCTTTTG
CAGATTGATGACTTGCCTAAGGTTTCTCTGACCAAAATTTTCAGACAATCCGAGGACTCCACCATCGTTACCTTAGCTAG
CCAGATGCGCCAAGGTCAACTACCTGCTGATTTCACAGAGAAAAAGGCTGACCGCTCTTACTTTGAGGCCAATGCCAACC
ATATTCCACAGATGGTTCCTAAAATTGTCTCTGCCGCTATAAAGAGCGGGATTGCTGCTCAGGATGTGCAGATTTTAGCC
CCCATGTACCGAGGACAGGCTGGAATTAACAATCTCAATACCATTATGCAGGACCTACTTAATCCTCAAGAAAAGGCCAA
TCAGTTTGCCTTTAATGATATTTTCTTCCGTAAGAACGACAAAATTCTCCATCTGGTCAACGATACCGAACTCAATGTCT
TCAATGGCGATATCGGAATCATTACTGATCTCATCCCTGATAAATATACTGAAAGCAAGCAGGACGAAATTTACATGTCC
TTTGATGGCAATGAGGTTATCTATCCTCGTAACGAATGGAATAAGATTACTCTGGCCTATGCCATGTCAATCCACAAATC
TCAAGGGAGTGAGTTCCCAGTCGTTATCCTTCCCATCACACGACAAAGTGGACGTATGCTACAACGCAACCTCATCTACA
CCGCTATCACACGCGCCAAGAGTAAACTAGTCATGTTAGGGGAAATCGCAGCCTTTGATTATGCCGTTCGCAACGAGGGA
GCTAAACGAAATACTTATCTCATCCAACGTTTTGAACAAACTTATACACAAGCTGTTGATAAGTCTGTCGAAAAGATTGT
TAAAAACGAGGCAACAGAGGCACCCGATCAAACAAAAACGAAAAACAACGATCCCTCAGAAACCCTTGAAAACAAAGACT
TTTCGGAAAATATCAATCTATCCCAAGATCTTGTTAACACTTATTCACAACCTGTGGATAAGTCTGTTAACAAACCTGTG
CAAACAGAAGAAAACTATCGCTTAACTGAAGAAAATTGGGCAACTATAGATCCAATGATTGGGCTCAGTGAAGACGATAT
TGCTGCCTTTTTTAACAATAACTAA

Domains

Predicted by InterProScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (659-705)

• Helix-hairpin-helix containing domain (HHH_RecD2) (147-237)

• AAA domain (AAA_30) (331-523)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (572-636)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD/recD2/recDB	Bacillus subtilis subsp. subtilis str. 168	45.067	89.928	0.405