Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   BSR08_RS11615 Genome accession   NZ_CP018184
Coordinates   2152021..2152716 (-) Length   231 a.a.
NCBI ID   WP_014480621.1    Uniprot ID   -
Organism   Bacillus subtilis strain KH2     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2147021..2157716
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSR08_RS11595 (BSR08_11775) yttA 2147448..2148194 (+) 747 WP_014480618.1 LMBR1 domain-containing protein -
  BSR08_RS11600 (BSR08_11780) bceB 2148231..2150171 (-) 1941 WP_014480619.1 bacitracin ABC transporter permease BceB -
  BSR08_RS11605 (BSR08_11785) bceA 2150161..2150922 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  BSR08_RS11610 (BSR08_11790) bceS 2151024..2152028 (-) 1005 WP_014480620.1 two-component sensor histidine kinase BceS -
  BSR08_RS11615 (BSR08_11795) braR 2152021..2152716 (-) 696 WP_014480621.1 two-component response regulator BceR Regulator
  BSR08_RS11620 (BSR08_11800) ytrF 2152813..2154123 (-) 1311 WP_014480622.1 ABC transporter permease YtrF -
  BSR08_RS11625 (BSR08_11805) ytrE 2154113..2154808 (-) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  BSR08_RS11630 (BSR08_11810) ytrD 2154823..2155800 (-) 978 WP_014480623.1 ABC transporter permease YtrD -
  BSR08_RS11635 (BSR08_11815) - 2155832..2156818 (-) 987 WP_014480624.1 ABC transporter permease subunit -
  BSR08_RS11640 (BSR08_11820) ytrB 2156812..2157690 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26908.74 Da        Isoelectric Point: 5.3731

>NTDB_id=173405 BSR08_RS11615 WP_014480621.1 2152021..2152716(-) (braR) [Bacillus subtilis strain KH2]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRQIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPNTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=173405 BSR08_RS11615 WP_014480621.1 2152021..2152716(-) (braR) [Bacillus subtilis strain KH2]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCAGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATCCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAATACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377

Multiple sequence alignment