Detailed information NTG0172527

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: AZE34_RS10815
• Genome accession: NZ_CP014567
• Coordinates: 2176737..2179160 (+)
• Length: 807 a.a.
• NCBI ID: WP_017176177.1
• Uniprot ID: -
• Organism: Staphylococcus hominis strain C34847
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2171737..2184160

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AZE34_RS10785 (AZE34_10550)	cymR	2171744..2172166 (+)	423	WP_002448977.1	cysteine metabolism transcriptional regulator CymR	-
AZE34_RS10790	-	2172276..2172419 (+)	144	WP_017176172.1	SAS049 family protein	-
AZE34_RS10795 (AZE34_10555)	-	2172518..2173522 (-)	1005	WP_017176173.1	LLM class flavin-dependent oxidoreductase	-
AZE34_RS10800 (AZE34_10560)	-	2173722..2174861 (+)	1140	WP_017176174.1	cysteine desulfurase family protein	-
AZE34_RS10805 (AZE34_10565)	mnmA	2174865..2175977 (+)	1113	WP_017176175.1	tRNA 2-thiouridine(34) synthase MnmA	-
AZE34_RS10810 (AZE34_10570)	-	2176064..2176735 (+)	672	WP_017176176.1	tetratricopeptide repeat protein	-
AZE34_RS10815 (AZE34_10575)	recD2	2176737..2179160 (+)	2424	WP_017176177.1	ATP-dependent RecD-like DNA helicase	Machinery gene
AZE34_RS10820 (AZE34_10580)	alaS	2179440..2182070 (+)	2631	WP_017176178.1	alanine--tRNA ligase	-
AZE34_RS10825 (AZE34_10585)	-	2182135..2182395 (+)	261	WP_002448947.1	IreB family regulatory phosphoprotein	-
AZE34_RS10830 (AZE34_10590)	ruvX	2182396..2182824 (+)	429	WP_017176179.1	Holliday junction resolvase RuvX	-
AZE34_RS10835 (AZE34_10595)	-	2182839..2183153 (+)	315	WP_017176180.1	DUF1292 domain-containing protein	-
AZE34_RS10840 (AZE34_10600)	-	2183414..2184049 (+)	636	WP_017176181.1	O-methyltransferase	-

Sequence

Protein

• Length: 807 a.a.
• Molecular weight: 91617.97 Da
• Isoelectric Point: 4.7254

>NTDB_id=172527 AZE34_RS10815 WP_017176177.1 2176737..2179160(+) (recD2) [Staphylococcus hominis strain C34847]
MSNPTLFDYSMVKGTVDTILFQNKDNFYTVLKVDSIETNESFDNLPTVVGFFPNIVEGDVYTFKGQIVQHPRYGKQLKAE
TFEKELPQTKDAIISYLSSDLFKGIGKKTAQNIVNTLGENAINDILTDPSVLENVPSLAKSKQKQIAEQISANQESEKIM
IRLHDLGFGPKLSMAIYQFYQSETLKILENNPYQLVYDVKGIGFQKADTLARNNGIAYNDSERLKAGLLYSLEEECIKQG
HTYLDENAVLEITEDMLSDKHLDETIEQEQLKHVLQTLFEEKKIILENSHVAIPSLYYSELKSVQNLYRINTYKNHFKII
EQSDLQIHIGEIEDQNNVNYAKSQQEALETAMNSKIMLLTGGPGTGKTTVIKGIVELYAEIHGLSLKYSDYQEDDYPIVL
AAPTGRASKRLQESTGLEAMTIHRLIGWNQDTQPEDILENEIKAKLIIIDEMSMVDSWLFHQFLSAVPLDAQIILVGDED
QLPSVGPGQVFKDLIESKAFPRVNLTEVYRQQDGSSIIDLAHRMKHHESIDITKRYHDRSFIHCNVEQIPTVVEKVVSSA
VNKGYDMSDIQVLAPMYKGSAGIKRLNQVLQNILNPKEKDTREIEFGDIKFRKGDKVLQLVNRPNDNIFNGDIGVIVGIF
WAKENALNKDVLIVDFEGNEITFTRQDLLELTHAYCTSIHKSQGSEFPIVIMPIVKQYFKMLQRPILYTGLTRAKQSLVL
LGDPKAFDIALNTQGQERHTQLKTLIINYFGMSQVNIDVEENDEPINIDDTEDNNADEHITLSEETIYQINPMINMGNVS
PYDFVEH

Nucleotide

• Length: 2424 bp

>NTDB_id=172527 AZE34_RS10815 WP_017176177.1 2176737..2179160(+) (recD2) [Staphylococcus hominis strain C34847]
ATGTCAAACCCTACACTATTTGATTACTCAATGGTTAAAGGAACAGTTGATACCATTCTATTTCAAAATAAAGATAACTT
TTATACTGTTTTAAAAGTAGATTCCATTGAAACTAATGAATCATTTGATAATCTGCCTACAGTTGTAGGGTTTTTTCCTA
ATATTGTTGAAGGAGATGTCTATACGTTTAAAGGACAAATTGTTCAACATCCTCGTTATGGTAAACAACTTAAAGCTGAA
ACATTTGAAAAAGAACTGCCTCAAACTAAAGATGCCATAATAAGTTATTTATCTAGTGATTTATTTAAAGGTATTGGTAA
AAAGACTGCTCAGAATATTGTAAATACATTAGGAGAAAATGCAATAAATGATATTTTAACTGATCCTTCTGTTCTCGAAA
ACGTTCCTAGTTTAGCAAAATCGAAACAAAAACAGATTGCAGAACAAATTAGTGCAAATCAAGAGTCAGAAAAAATAATG
ATTCGCTTACATGACTTAGGTTTTGGTCCAAAATTATCCATGGCGATTTATCAATTTTATCAATCAGAGACTTTAAAAAT
TCTAGAAAACAATCCATACCAATTAGTTTATGATGTAAAAGGTATTGGTTTTCAAAAAGCTGATACATTAGCTAGAAATA
ATGGTATTGCTTATAACGATTCAGAACGTTTAAAAGCTGGGTTATTATATTCTCTTGAAGAAGAATGTATAAAACAGGGA
CATACTTATTTAGATGAAAATGCTGTATTAGAAATTACAGAAGATATGCTTTCAGATAAGCATTTAGATGAAACAATTGA
ACAAGAACAATTAAAACATGTGCTACAAACACTTTTTGAAGAAAAGAAAATTATTTTAGAGAATAGTCATGTTGCGATTC
CAAGTTTATACTATTCAGAACTTAAAAGTGTTCAAAATTTGTATCGTATCAACACATACAAAAATCACTTTAAAATAATA
GAGCAATCAGATTTACAGATACATATTGGTGAAATAGAAGATCAAAATAATGTTAATTATGCTAAATCACAACAAGAAGC
ACTTGAAACGGCGATGAATTCGAAAATAATGTTACTAACTGGAGGTCCAGGAACAGGTAAAACAACTGTTATTAAAGGGA
TTGTAGAATTGTATGCTGAAATTCATGGTCTATCTCTTAAGTATTCCGATTATCAAGAAGATGATTATCCAATCGTATTA
GCCGCCCCAACTGGAAGGGCATCAAAACGTTTACAAGAATCAACTGGATTAGAAGCAATGACGATTCATCGATTAATAGG
ATGGAATCAAGATACTCAACCAGAAGATATTCTTGAAAATGAAATTAAAGCTAAGCTCATTATAATTGATGAAATGTCAA
TGGTTGATTCTTGGTTGTTCCATCAATTTTTAAGTGCCGTTCCACTAGATGCACAAATTATTTTAGTAGGCGATGAAGAT
CAATTGCCGTCTGTCGGTCCTGGCCAAGTATTTAAGGATTTAATTGAGTCTAAAGCATTTCCAAGAGTTAATTTAACTGA
AGTTTATCGCCAACAAGATGGTTCTAGTATTATTGACTTAGCTCATCGCATGAAACATCATGAGTCAATAGATATTACAA
AACGTTATCACGATAGAAGTTTTATTCATTGCAATGTAGAACAAATTCCAACCGTAGTGGAGAAAGTAGTATCTAGCGCT
GTAAATAAAGGATATGATATGAGTGATATTCAAGTTTTAGCACCTATGTACAAAGGAAGTGCAGGGATAAAAAGACTTAA
TCAAGTATTACAAAATATTTTAAATCCTAAAGAAAAAGATACAAGAGAAATAGAGTTTGGCGATATAAAGTTTAGAAAAG
GAGACAAAGTTTTACAACTAGTTAATCGACCAAATGACAATATTTTTAATGGTGATATTGGCGTCATAGTAGGTATATTT
TGGGCTAAAGAAAATGCACTTAATAAAGATGTACTGATTGTCGATTTTGAAGGAAATGAAATTACATTTACTAGACAAGA
TTTATTAGAACTTACACATGCTTATTGTACCTCAATCCATAAATCACAAGGATCAGAATTCCCAATTGTTATTATGCCTA
TTGTCAAACAATATTTTAAAATGTTGCAAAGACCTATTTTATATACAGGTCTGACACGTGCAAAACAATCTTTAGTACTA
TTAGGAGATCCAAAAGCATTTGACATTGCCTTAAATACTCAAGGTCAAGAAAGACATACACAATTAAAAACACTAATTAT
AAATTATTTTGGTATGAGTCAGGTTAATATAGACGTAGAAGAGAATGATGAACCGATAAATATAGATGATACAGAGGATA
ATAATGCAGATGAACACATTACTTTAAGTGAAGAAACAATTTATCAAATTAATCCAATGATTAATATGGGAAATGTTTCA
CCTTACGACTTTGTTGAACATTGA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (673-721)

• AAA domain (AAA_30) (340-545)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (586-656)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	49.129	99.628	0.489