Detailed information NTG0172299

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: AYR69_RS10015
• Genome accession: NZ_CP014540
• Coordinates: 2089193..2089894 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain XH857
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2084193..2094894

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AYR69_RS09985 (AYR69_09985)	-	2084499..2084942 (-)	444	WP_001246675.1	SRPBCC family protein	-
AYR69_RS09990 (AYR69_09990)	tadA	2085012..2085515 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
AYR69_RS09995 (AYR69_09995)	-	2085522..2086646 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
AYR69_RS10000 (AYR69_10000)	ung	2086643..2087356 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
AYR69_RS10005 (AYR69_10005)	-	2087407..2088003 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
AYR69_RS10010 (AYR69_10010)	gspK	2088234..2089193 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
AYR69_RS10015 (AYR69_10015)	xcpW	2089193..2089894 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
AYR69_RS10020 (AYR69_10020)	xcpV	2089894..2090274 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
AYR69_RS10025 (AYR69_10025)	-	2090264..2090818 (-)	555	WP_000841373.1	type II secretion system protein	-
AYR69_RS10030 (AYR69_10030)	-	2090828..2091436 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
AYR69_RS10035 (AYR69_10035)	-	2091474..2092247 (-)	774	WP_000497298.1	TatD family hydrolase	-
AYR69_RS10040 (AYR69_10040)	-	2092265..2092606 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
AYR69_RS10045 (AYR69_10045)	-	2092618..2093598 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
AYR69_RS10050 (AYR69_10050)	kdsB	2093610..2094371 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=172299 AYR69_RS10015 WP_000594589.1 2089193..2089894(-) (xcpW) [Acinetobacter baumannii strain XH857]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=172299 AYR69_RS10015 WP_000594589.1 2089193..2089894(-) (xcpW) [Acinetobacter baumannii strain XH857]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996