Detailed information NTG0172251

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: AYR68_RS09750
• Genome accession: NZ_CP014539
• Coordinates: 2044085..2044786 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain XH859
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2039085..2049786

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AYR68_RS09720 (AYR68_09720)	-	2039391..2039834 (-)	444	WP_001246675.1	SRPBCC family protein	-
AYR68_RS09725 (AYR68_09725)	tadA	2039904..2040407 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
AYR68_RS09730 (AYR68_09730)	-	2040414..2041538 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
AYR68_RS09735 (AYR68_09735)	ung	2041535..2042248 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
AYR68_RS09740 (AYR68_09740)	-	2042299..2042895 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
AYR68_RS09745 (AYR68_09745)	gspK	2043126..2044085 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
AYR68_RS09750 (AYR68_09750)	xcpW	2044085..2044786 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
AYR68_RS09755 (AYR68_09755)	xcpV	2044786..2045166 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
AYR68_RS09760 (AYR68_09760)	-	2045156..2045710 (-)	555	WP_000841373.1	type II secretion system protein	-
AYR68_RS09765 (AYR68_09765)	-	2045720..2046328 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
AYR68_RS09770 (AYR68_09770)	-	2046366..2047139 (-)	774	WP_000497298.1	TatD family hydrolase	-
AYR68_RS09775 (AYR68_09775)	-	2047157..2047498 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
AYR68_RS09780 (AYR68_09780)	-	2047510..2048490 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
AYR68_RS09785 (AYR68_09785)	kdsB	2048502..2049263 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=172251 AYR68_RS09750 WP_000594589.1 2044085..2044786(-) (xcpW) [Acinetobacter baumannii strain XH859]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=172251 AYR68_RS09750 WP_000594589.1 2044085..2044786(-) (xcpW) [Acinetobacter baumannii strain XH859]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996