Detailed information NTG0172207

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: AYR67_RS10110
• Genome accession: NZ_CP014538
• Coordinates: 2158521..2159222 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain XH860
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2153521..2164222

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AYR67_RS10080 (AYR67_10080)	-	2153827..2154270 (-)	444	WP_001246675.1	SRPBCC family protein	-
AYR67_RS10085 (AYR67_10085)	tadA	2154340..2154843 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
AYR67_RS10090 (AYR67_10090)	-	2154850..2155974 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
AYR67_RS10095 (AYR67_10095)	ung	2155971..2156684 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
AYR67_RS10100 (AYR67_10100)	-	2156735..2157331 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
AYR67_RS10105 (AYR67_10105)	gspK	2157562..2158521 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
AYR67_RS10110 (AYR67_10110)	xcpW	2158521..2159222 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
AYR67_RS10115 (AYR67_10115)	xcpV	2159222..2159602 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
AYR67_RS10120 (AYR67_10120)	-	2159592..2160146 (-)	555	WP_000841373.1	type II secretion system protein	-
AYR67_RS10125 (AYR67_10125)	-	2160156..2160764 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
AYR67_RS10130 (AYR67_10130)	-	2160802..2161575 (-)	774	WP_000497298.1	TatD family hydrolase	-
AYR67_RS10135 (AYR67_10135)	-	2161593..2161934 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
AYR67_RS10140 (AYR67_10140)	-	2161946..2162926 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
AYR67_RS10145 (AYR67_10145)	kdsB	2162938..2163699 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=172207 AYR67_RS10110 WP_000594589.1 2158521..2159222(-) (xcpW) [Acinetobacter baumannii strain XH860]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=172207 AYR67_RS10110 WP_000594589.1 2158521..2159222(-) (xcpW) [Acinetobacter baumannii strain XH860]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996