Detailed information NTG0172121

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: AZE33_RS18400
• Genome accession: NZ_CP014528
• Coordinates: 3815847..3816905 (-)
• Length: 352 a.a.
• NCBI ID: WP_038346731.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain XH858
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3810847..3821905

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AZE33_RS18375 (AZE33_18375)	aroK	3811122..3811691 (-)	570	WP_000643712.1	shikimate kinase AroK	-
AZE33_RS18380 (AZE33_18380)	pilQ	3811703..3813868 (-)	2166	WP_001017033.1	type IV pilus secretin PilQ family protein	Machinery gene
AZE33_RS18385 (AZE33_18385)	pilP	3813931..3814458 (-)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
AZE33_RS18390 (AZE33_18390)	pilO	3814469..3815209 (-)	741	WP_000076099.1	type 4a pilus biogenesis protein PilO	Machinery gene
AZE33_RS18395 (AZE33_18395)	pilN	3815206..3815847 (-)	642	WP_020753500.1	PilN domain-containing protein	Machinery gene
AZE33_RS18400 (AZE33_18400)	pilM	3815847..3816905 (-)	1059	WP_038346731.1	pilus assembly protein PilM	Machinery gene
AZE33_RS18405 (AZE33_18405)	ponA	3817066..3819621 (+)	2556	WP_000736683.1	penicillin-binding protein PBP1a	-
AZE33_RS18410 (AZE33_18410)	-	3819639..3820463 (-)	825	WP_002019666.1	putative RNA methyltransferase	-
AZE33_RS18415 (AZE33_18415)	-	3820466..3820798 (-)	333	WP_000169603.1	DUF7709 family protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39060.64 Da
• Isoelectric Point: 4.4618

>NTDB_id=172121 AZE33_RS18400 WP_038346731.1 3815847..3816905(-) (pilM) [Acinetobacter baumannii strain XH858]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
VDLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=172121 AZE33_RS18400 WP_038346731.1 3815847..3816905(-) (pilM) [Acinetobacter baumannii strain XH858]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACCCGCGTTGAAGTGCTTGAATTG
GTAGATTTAAATCCTAAATTGGCTGATGTTGAAAGTTACGCGGTTGAACGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTCTTTGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGTTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	99.716	100	0.997
comM	Acinetobacter nosocomialis M2	98.864	100	0.989
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	41.808	100	0.42