Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | AZE33_RS18250 | Genome accession | NZ_CP014528 |
| Coordinates | 3781542..3781967 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788337.1 | Uniprot ID | A0A009SG52 |
| Organism | Acinetobacter baumannii strain XH858 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3776542..3786967
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AZE33_RS18220 (AZE33_18220) | - | 3777072..3778106 (+) | 1035 | WP_001189446.1 | lipase secretion chaperone | - |
| AZE33_RS18225 (AZE33_18225) | - | 3778221..3779162 (+) | 942 | WP_085916958.1 | lipase family alpha/beta hydrolase | - |
| AZE33_RS18230 (AZE33_18230) | rplS | 3779214..3779582 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| AZE33_RS18235 (AZE33_18235) | trmD | 3779790..3780530 (-) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| AZE33_RS18240 (AZE33_18240) | rimM | 3780576..3781124 (-) | 549 | WP_020753489.1 | ribosome maturation factor RimM | - |
| AZE33_RS18245 (AZE33_18245) | rpsP | 3781144..3781395 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| AZE33_RS18250 (AZE33_18250) | pilE | 3781542..3781967 (-) | 426 | WP_000788337.1 | type IV pilin protein | Machinery gene |
| AZE33_RS18255 (AZE33_18255) | pilY2 | 3781964..3782446 (-) | 483 | WP_020753490.1 | type IV pilin protein | Machinery gene |
| AZE33_RS18260 (AZE33_18260) | pilY1 | 3782459..3786313 (-) | 3855 | WP_020753491.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15163.36 Da Isoelectric Point: 7.8144
>NTDB_id=172109 AZE33_RS18250 WP_000788337.1 3781542..3781967(-) (pilE) [Acinetobacter baumannii strain XH858]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=172109 AZE33_RS18250 WP_000788337.1 3781542..3781967(-) (pilE) [Acinetobacter baumannii strain XH858]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTTGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTTGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
90.78 |
100 |
0.908 |
| comF | Acinetobacter baylyi ADP1 |
50 |
99.291 |
0.496 |