Detailed information NTG0172100

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: AZE33_RS09300
• Genome accession: NZ_CP014528
• Coordinates: 1943544..1944245 (+)
• Length: 233 a.a.
• NCBI ID: WP_020753089.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain XH858
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1938544..1949245

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AZE33_RS09265 (AZE33_09265)	kdsB	1939067..1939828 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
AZE33_RS09270 (AZE33_09270)	-	1939840..1940820 (+)	981	WP_038346636.1	DNA polymerase III subunit delta'	-
AZE33_RS09275 (AZE33_09275)	-	1940832..1941173 (+)	342	WP_020753088.1	PilZ domain-containing protein	-
AZE33_RS09280 (AZE33_09280)	-	1941191..1941964 (+)	774	WP_000497298.1	TatD family hydrolase	-
AZE33_RS09285 (AZE33_09285)	-	1942002..1942610 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
AZE33_RS09290 (AZE33_09290)	-	1942620..1943174 (+)	555	WP_000841373.1	type II secretion system protein	-
AZE33_RS09295 (AZE33_09295)	xcpV	1943164..1943544 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
AZE33_RS09300 (AZE33_09300)	xcpW	1943544..1944245 (+)	702	WP_020753089.1	type II secretion system minor pseudopilin GspJ	Machinery gene
AZE33_RS09305 (AZE33_09305)	gspK	1944245..1945204 (+)	960	WP_001218621.1	type II secretion system minor pseudopilin GspK	-
AZE33_RS09310 (AZE33_09310)	-	1945434..1946030 (+)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
AZE33_RS09315 (AZE33_09315)	ung	1946081..1946794 (+)	714	WP_001177527.1	uracil-DNA glycosylase	-
AZE33_RS09320 (AZE33_09320)	-	1946791..1947915 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
AZE33_RS09325 (AZE33_09325)	tadA	1947922..1948425 (+)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
AZE33_RS09330 (AZE33_09330)	-	1948495..1948938 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26599.56 Da
• Isoelectric Point: 9.5501

>NTDB_id=172100 AZE33_RS09300 WP_020753089.1 1943544..1944245(+) (xcpW) [Acinetobacter baumannii strain XH858]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQDGNS

Nucleotide

• Length: 702 bp

>NTDB_id=172100 AZE33_RS09300 WP_020753089.1 1943544..1944245(+) (xcpW) [Acinetobacter baumannii strain XH858]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGACGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	98.712	100	0.987