Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | AYM29_RS08830 | Genome accession | NZ_CP014420 |
| Coordinates | 1701500..1701799 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain USA300-SUR16 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1696500..1706799
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYM29_RS08805 (AYM29_08565) | gcvPA | 1697712..1699058 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| AYM29_RS08810 (AYM29_08570) | gcvT | 1699078..1700169 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| AYM29_RS08815 (AYM29_08575) | - | 1700328..1700852 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| AYM29_RS08820 (AYM29_08580) | - | 1700842..1700988 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| AYM29_RS08825 (AYM29_08585) | comGF | 1701085..1701582 (-) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| AYM29_RS08830 (AYM29_08590) | comGE | 1701500..1701799 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| AYM29_RS08835 (AYM29_08595) | comGD | 1701786..1702232 (-) | 447 | WP_001791635.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| AYM29_RS08840 (AYM29_08600) | comGC | 1702210..1702521 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AYM29_RS08845 (AYM29_08605) | comGB | 1702535..1703605 (-) | 1071 | WP_000775708.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| AYM29_RS08850 (AYM29_08610) | comGA | 1703577..1704551 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AYM29_RS08855 (AYM29_08615) | - | 1704603..1705226 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| AYM29_RS08860 (AYM29_08620) | - | 1705223..1705552 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| AYM29_RS08865 (AYM29_08625) | - | 1705552..1706538 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| AYM29_RS08870 (AYM29_08630) | - | 1706535..1706738 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=171317 AYM29_RS08830 WP_000844413.1 1701500..1701799(-) (comGE) [Staphylococcus aureus strain USA300-SUR16]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=171317 AYM29_RS08830 WP_000844413.1 1701500..1701799(-) (comGE) [Staphylococcus aureus strain USA300-SUR16]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |