Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | AYM22_RS08820 | Genome accession | NZ_CP014392 |
| Coordinates | 1701342..1701641 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain USA300-SUR9 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1696342..1706641
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYM22_RS08795 (AYM22_08560) | gcvPA | 1697554..1698900 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| AYM22_RS08800 (AYM22_08565) | gcvT | 1698920..1700011 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| AYM22_RS08805 (AYM22_08570) | - | 1700170..1700694 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| AYM22_RS08810 (AYM22_08575) | - | 1700684..1700830 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| AYM22_RS08815 (AYM22_08580) | comGF | 1700927..1701424 (-) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| AYM22_RS08820 (AYM22_08585) | comGE | 1701342..1701641 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| AYM22_RS08825 (AYM22_08590) | comGD | 1701628..1702074 (-) | 447 | WP_001791635.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| AYM22_RS08830 (AYM22_08595) | comGC | 1702052..1702363 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AYM22_RS08835 (AYM22_08600) | comGB | 1702377..1703447 (-) | 1071 | WP_000775708.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| AYM22_RS08840 (AYM22_08605) | comGA | 1703419..1704393 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AYM22_RS08845 (AYM22_08610) | - | 1704445..1705068 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| AYM22_RS08850 (AYM22_08615) | - | 1705065..1705394 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| AYM22_RS08855 (AYM22_08620) | - | 1705394..1706380 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| AYM22_RS08860 (AYM22_08625) | - | 1706377..1706580 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=171025 AYM22_RS08820 WP_000844413.1 1701342..1701641(-) (comGE) [Staphylococcus aureus strain USA300-SUR9]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=171025 AYM22_RS08820 WP_000844413.1 1701342..1701641(-) (comGE) [Staphylococcus aureus strain USA300-SUR9]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |