Detailed information NTG0170586

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: BKN48_RS02975
• Genome accession: NZ_CP017676
• Coordinates: 512155..513420 (+)
• Length: 421 a.a.
• NCBI ID: WP_032726297.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain VV2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 507155..518420

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BKN48_RS02955 (BKN48_02955)	yrrB	508526..509146 (-)	621	WP_236824392.1	tetratricopeptide repeat protein	-
BKN48_RS02960 (BKN48_02960)	mnmA	509232..510347 (-)	1116	WP_070547593.1	tRNA 2-thiouridine(34) synthase MnmA	-
BKN48_RS02965 (BKN48_02965)	iscSA	510378..511517 (-)	1140	WP_070547594.1	cysteine desulfurase family protein	-
BKN48_RS02970 (BKN48_02970)	cymR	511536..511952 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
BKN48_RS02975 (BKN48_02975)	rarA	512155..513420 (+)	1266	WP_032726297.1	replication-associated recombination protein A	Machinery gene
BKN48_RS02980 (BKN48_02980)	tcdA	513460..514224 (-)	765	WP_070547595.1	tRNA threonylcarbamoyladenosine dehydratase	-
BKN48_RS02990 (BKN48_02990)	aspS	514560..516338 (-)	1779	WP_015384241.1	aspartate--tRNA ligase	-
BKN48_RS02995 (BKN48_02995)	hisS	516352..517626 (-)	1275	WP_070547596.1	histidine--tRNA ligase	-
BKN48_RS03000 (BKN48_03000)	yrzK	518008..518178 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46472.34 Da
• Isoelectric Point: 7.2042

>NTDB_id=170586 BKN48_RS02975 WP_032726297.1 512155..513420(+) (rarA) [Bacillus subtilis strain VV2]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIKAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=170586 BKN48_RS02975 WP_032726297.1 512155..513420(+) (rarA) [Bacillus subtilis strain VV2]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTTTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCACTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAAAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.525	100	0.995