Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | AXA63_RS16465 | Genome accession | NZ_CP014215 |
| Coordinates | 3394654..3395079 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788342.1 | Uniprot ID | N9K1U0 |
| Organism | Acinetobacter baumannii strain YU-R612 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3389654..3400079
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AXA63_RS16435 (AXA63_16435) | - | 3390182..3391216 (+) | 1035 | WP_001189447.1 | lipase secretion chaperone | - |
| AXA63_RS16440 (AXA63_16440) | - | 3391331..3392272 (+) | 942 | WP_085916958.1 | triacylglycerol lipase | - |
| AXA63_RS16445 (AXA63_16445) | rplS | 3392325..3392693 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| AXA63_RS16450 (AXA63_16450) | trmD | 3392902..3393642 (-) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| AXA63_RS16455 (AXA63_16455) | rimM | 3393688..3394236 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| AXA63_RS16460 (AXA63_16460) | rpsP | 3394256..3394507 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| AXA63_RS16465 (AXA63_16465) | pilE | 3394654..3395079 (-) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| AXA63_RS16470 (AXA63_16470) | pilY2 | 3395076..3395558 (-) | 483 | WP_001046420.1 | type IV pilin protein | Machinery gene |
| AXA63_RS16475 (AXA63_16475) | pilY1 | 3395571..3399425 (-) | 3855 | WP_000768970.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15214.45 Da Isoelectric Point: 7.8464
>NTDB_id=169492 AXA63_RS16465 WP_000788342.1 3394654..3395079(-) (pilE) [Acinetobacter baumannii strain YU-R612]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=169492 AXA63_RS16465 WP_000788342.1 3394654..3395079(-) (pilE) [Acinetobacter baumannii strain YU-R612]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
92.199 |
100 |
0.922 |
| comF | Acinetobacter baylyi ADP1 |
52.143 |
99.291 |
0.518 |