Detailed information NTG0167554

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: BHU02_RS03850
• Genome accession: NZ_CP017271
• Coordinates: 751525..753942 (+)
• Length: 805 a.a.
• NCBI ID: WP_016264861.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei subsp. sakei strain TMW 1.1189
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 746525..758942

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BHU02_RS03820 (BHU02_03750)	recN	746839..748542 (+)	1704	WP_056936394.1	DNA repair protein RecN	Machinery gene
BHU02_RS03825 (BHU02_03755)	-	748601..748924 (-)	324	WP_025015871.1	hypothetical protein	-
BHU02_RS03830 (BHU02_03760)	-	749044..749271 (+)	228	WP_197703335.1	YdbC family protein	-
BHU02_RS03835 (BHU02_03765)	gmk	749344..749955 (+)	612	WP_011374394.1	guanylate kinase	-
BHU02_RS03840 (BHU02_03770)	rpoZ	749960..750217 (+)	258	WP_011374395.1	DNA-directed RNA polymerase subunit omega	-
BHU02_RS03845 (BHU02_03775)	coaBC	750306..751523 (+)	1218	WP_016264860.1	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	-
BHU02_RS03850 (BHU02_03780)	priA	751525..753942 (+)	2418	WP_016264861.1	primosomal protein N'	Machinery gene
BHU02_RS03855 (BHU02_03785)	fmt	753962..754918 (+)	957	WP_025015869.1	methionyl-tRNA formyltransferase	-
BHU02_RS03860 (BHU02_03790)	rsmB	754908..756251 (+)	1344	WP_056936395.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
BHU02_RS03865 (BHU02_03795)	-	756273..757019 (+)	747	WP_025015868.1	Stp1/IreP family PP2C-type Ser/Thr phosphatase	-
BHU02_RS03870 (BHU02_03800)	pknB	757016..758899 (+)	1884	WP_025015867.1	Stk1 family PASTA domain-containing Ser/Thr kinase	Regulator

Sequence

Protein

• Length: 805 a.a.
• Molecular weight: 90603.18 Da
• Isoelectric Point: 8.0167

>NTDB_id=167554 BHU02_RS03850 WP_016264861.1 751525..753942(+) (priA) [Latilactobacillus sakei subsp. sakei strain TMW 1.1189]
MPQIAKVIVDVPTMQTNRPYDYQVPVTLVDVIQPGMRVIIPFGNGDRKIQGFVLQVLDQPSFTGQLKAIEAVVDLTPAVN
PELLSLSDWLAQQTYAFQITCLQTMLPSVMRAKYTKTATLIDEIPADLQASLFNGNDELTFDQNLAPDKLKQLMQLQRQG
KISVTYHVDNRAQVKQLTAIEPALSFEQLEEARMGLRKSAQKQSQLISYLQTLIDQEAPTLLKTILEKTTFTRENIRIGA
EKGWLRQVKVEAYRNPYANAVQPTHKMTLTSEQKTAVDAVVQSASTDASEVFLIEGVTGSGKTEVYLQTIDAVLQQGKTA
LMLVPEIALTPQMVQRVKGRFGDLVAVLHSGLSEGEKYDEWRRIERKEARVVVGARSAIFAPLEDIGVIIMDEEHEASYK
QDESPRYHARDVAIWRSQYHHCPVILGSATPSLESRARAQKDVYHLIRLTQRVNQQALPAVELVDMREAMKVQKASNFSP
ALLAGIKERLQKGEQSVLLLNRRGFSSFIMCRDCGFVLQCPNCDISLTLHMDTHSMKCHYCGHEEAIPRICPSCQSRQIR
YFGTGTQKVEAELQELIPEARILRMDVDTTRKKGAHAKLLKKFGDHEADILLGTQMIAKGLDFPDVTLVGVINADTALGL
PDFRASERTFQLLTQVSGRAGRADKVGQVIVQSYNPENYAIQFAKQHDYEGFYQYEMAVRHRGGYPPYYFTVKVTVSHPE
EALAAKKSFQIAKQMRPILSDQALILGPTPKSIARINNRYFYQIVIKYKQEPQLQAKLAEILETTQIDTRHGFKIGLDNE
PLQFT

Nucleotide

• Length: 2418 bp

>NTDB_id=167554 BHU02_RS03850 WP_016264861.1 751525..753942(+) (priA) [Latilactobacillus sakei subsp. sakei strain TMW 1.1189]
ATGCCACAGATTGCTAAAGTAATCGTTGATGTGCCGACAATGCAAACTAATCGGCCATATGATTATCAGGTACCGGTCAC
TTTAGTTGATGTCATTCAACCTGGGATGCGGGTTATTATTCCGTTTGGAAATGGTGATCGTAAGATTCAGGGCTTTGTCT
TGCAAGTTTTAGACCAGCCAAGCTTTACGGGCCAATTAAAGGCAATCGAGGCAGTTGTTGATTTAACGCCAGCGGTTAAC
CCTGAATTACTATCACTTTCAGATTGGTTAGCACAACAGACGTACGCTTTTCAGATCACGTGTCTGCAGACGATGTTACC
CAGTGTGATGCGGGCTAAATATACGAAAACTGCGACGTTAATTGATGAAATTCCAGCGGACTTACAGGCCAGTCTGTTCA
ATGGCAATGACGAGTTGACTTTTGATCAGAATCTAGCGCCTGATAAGTTAAAACAACTCATGCAATTGCAGCGCCAAGGT
AAAATTAGCGTCACTTATCACGTTGATAACCGGGCACAAGTTAAGCAATTAACGGCGATTGAGCCCGCACTGAGTTTTGA
ACAATTGGAAGAAGCACGGATGGGTTTACGAAAGTCAGCCCAGAAGCAAAGCCAATTAATCAGTTATCTGCAAACGCTGA
TTGATCAAGAGGCACCAACTTTATTAAAAACGATTTTAGAAAAAACAACTTTTACGCGGGAAAATATTCGAATCGGTGCG
GAAAAAGGCTGGTTACGCCAAGTTAAGGTGGAAGCTTACCGGAATCCGTACGCTAATGCTGTTCAACCAACCCACAAAAT
GACGCTAACGAGCGAACAAAAAACCGCAGTTGATGCGGTCGTTCAATCCGCATCAACGGATGCCTCAGAAGTATTCTTAA
TTGAAGGTGTCACCGGCAGTGGGAAGACCGAAGTTTATTTACAAACAATTGATGCGGTCTTGCAACAAGGCAAGACCGCA
CTGATGTTAGTCCCTGAAATTGCTTTGACGCCGCAGATGGTGCAACGCGTGAAGGGCCGCTTTGGTGATTTAGTTGCTGT
GTTACATAGTGGCTTGTCTGAAGGTGAGAAATACGACGAATGGCGGCGCATTGAACGCAAAGAAGCGCGCGTGGTCGTCG
GTGCCCGCTCAGCCATTTTTGCGCCACTTGAAGATATTGGCGTGATTATTATGGATGAAGAACATGAAGCCAGTTATAAA
CAAGACGAAAGTCCGCGTTATCATGCACGCGACGTTGCGATTTGGCGGAGTCAGTATCATCACTGCCCCGTCATTTTAGG
CAGCGCCACGCCATCGTTAGAATCCCGCGCTCGGGCGCAAAAAGATGTCTACCATCTGATTCGCCTGACGCAACGGGTGA
ACCAACAAGCCTTACCAGCTGTTGAACTAGTTGATATGCGCGAAGCGATGAAGGTTCAAAAAGCCAGCAACTTTTCACCG
GCGTTATTAGCCGGCATCAAAGAACGGCTGCAAAAGGGCGAACAAAGTGTGTTACTCCTAAATCGTCGCGGTTTTTCATC
ATTTATCATGTGTCGGGATTGCGGGTTTGTCTTGCAGTGTCCCAACTGTGATATTTCGTTGACGTTACACATGGATACGC
ATTCGATGAAATGCCATTATTGTGGGCACGAAGAAGCCATTCCTAGGATTTGCCCTAGCTGTCAGAGTCGCCAAATTCGT
TATTTTGGGACTGGCACGCAAAAAGTCGAAGCTGAATTACAAGAATTAATCCCTGAAGCACGGATTTTGCGGATGGACGT
TGATACGACTCGGAAAAAAGGCGCGCATGCTAAATTATTGAAAAAATTTGGTGATCACGAAGCTGATATCTTATTAGGGA
CGCAGATGATTGCCAAAGGCTTAGATTTCCCAGATGTAACGTTAGTCGGGGTGATCAACGCTGATACAGCTTTGGGTTTA
CCGGATTTTCGGGCGAGTGAGCGGACTTTCCAATTATTAACGCAGGTTAGTGGTCGTGCGGGTCGTGCGGATAAGGTGGG
GCAAGTGATTGTTCAATCTTATAATCCCGAGAATTACGCGATTCAATTTGCTAAACAGCACGATTATGAAGGATTTTATC
AATATGAAATGGCGGTGCGCCACCGTGGCGGCTATCCGCCTTATTACTTTACGGTGAAGGTGACGGTTAGCCACCCTGAA
GAAGCACTTGCCGCAAAGAAGAGTTTTCAAATTGCCAAACAGATGCGACCGATTTTATCCGACCAAGCACTGATTCTCGG
GCCCACCCCGAAATCAATTGCGCGGATTAATAATCGTTATTTTTACCAAATTGTGATTAAATATAAACAGGAACCACAAC
TTCAGGCTAAATTAGCCGAAATACTAGAGACCACCCAAATCGATACTCGTCACGGGTTTAAGATTGGGCTGGATAATGAA
CCTCTACAATTTACTTAA

Domains

Predicted by InterProScan.

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (520-545)

• Type III restriction enzyme, res subunit (ResIII) (266-432)

• Primosomal protein N C-terminal domain (PriA_C) (707-801)

• Helicase conserved C-terminal domain (Helicase_C) (562-663)

• 3DNA-binding domain (3BD) (PriA_3primeBD) (6-107)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Bacillus subtilis subsp. subtilis str. 168	51.792	100	0.52