Detailed information NTG0167055

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: AWQ23_RS02665
• Genome accession: NZ_CP013998
• Coordinates: 562640..563743 (+)
• Length: 367 a.a.
• NCBI ID: WP_062432248.1
• Uniprot ID: -
• Organism: Picosynechococcus sp. PCC 73109
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 557640..568743

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AWQ23_RS02635 (AWQ23_02635)	-	557775..558125 (+)	351	WP_062432226.1	DUF4870 domain-containing protein	-
AWQ23_RS02640 (AWQ23_02640)	-	558345..559145 (+)	801	WP_062432229.1	response regulator transcription factor	-
AWQ23_RS02645 (AWQ23_02645)	-	559153..559884 (-)	732	WP_062432240.1	ATP-binding cassette domain-containing protein	-
AWQ23_RS02650 (AWQ23_02650)	-	559916..560590 (-)	675	WP_062432243.1	RibD family protein	-
AWQ23_RS02655 (AWQ23_02655)	-	560583..561026 (-)	444	WP_030007109.1	DUF3531 family protein	-
AWQ23_RS02660 (AWQ23_02660)	-	561147..562427 (-)	1281	WP_062432246.1	ABC transporter substrate-binding protein	-
AWQ23_RS02665 (AWQ23_02665)	pilM	562640..563743 (+)	1104	WP_062432248.1	type IV pilus assembly protein PilM	Machinery gene
AWQ23_RS02670 (AWQ23_02670)	-	563748..564479 (+)	732	WP_062432249.1	PilN domain-containing protein	-
AWQ23_RS02675 (AWQ23_02675)	-	564530..565336 (+)	807	WP_062432251.1	hypothetical protein	-
AWQ23_RS02680 (AWQ23_02680)	-	565569..567953 (+)	2385	WP_062432254.1	AMIN domain-containing protein	-
AWQ23_RS02685 (AWQ23_02685)	-	568033..568617 (+)	585	WP_062432257.1	transposase	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 40615.69 Da
• Isoelectric Point: 4.2653

>NTDB_id=167055 AWQ23_RS02665 WP_062432248.1 562640..563743(+) (pilM) [Picosynechococcus sp. PCC 73109]
MLDFFKNIFKPKRKGIGIEISTERLNIVQLKKQGQVYKLATYITEPVPEGIFEEGKIVDVPALAELIQNTLSANNISAKQ
VTAAVPMREAIIRLIPIPAELDDAELRDMVLNHEASLYLPYPREEVDLDYQKLGFFQDEDGIEKVQVLLVATRREVTDAY
VETIVQAGLEINILEINSFALLRTIREQLRQFSSQEAVVLVDIEFDCTEIAIVVDGVPQFSRTVPIGASQLQNALSRAMN
LPAPRDIELLQGMTIPNTPMEGSRTGATGINPGMAALLRVLGELTDELRRSIDFYLNQSGELEVAQLMLAGPGGGISQLD
EFFTQRLSIPTIQIDPFEALSIDVDEEISKVQRPSLGTALGLGLREV

Nucleotide

• Length: 1104 bp

>NTDB_id=167055 AWQ23_RS02665 WP_062432248.1 562640..563743(+) (pilM) [Picosynechococcus sp. PCC 73109]
ATGCTAGATTTCTTCAAAAATATCTTCAAACCAAAGCGTAAAGGGATTGGCATCGAGATCTCAACGGAACGCTTAAACAT
TGTCCAACTCAAAAAACAGGGACAGGTCTATAAGCTGGCGACCTACATCACCGAACCCGTCCCCGAAGGCATTTTTGAAG
AAGGAAAAATTGTTGATGTTCCCGCCCTCGCCGAGCTGATCCAAAATACCCTCAGCGCCAACAACATCAGCGCCAAACAG
GTTACGGCCGCCGTGCCCATGCGGGAGGCAATTATCCGCCTGATCCCGATCCCCGCCGAACTCGATGATGCCGAACTGCG
GGATATGGTCCTCAACCACGAAGCAAGCCTCTACCTGCCCTACCCCCGCGAAGAAGTGGATCTCGATTACCAAAAACTTG
GGTTTTTCCAAGATGAAGATGGCATTGAAAAGGTGCAAGTTCTGTTGGTGGCCACCCGGCGAGAAGTGACCGACGCCTAT
GTGGAGACCATTGTCCAGGCGGGACTAGAGATCAATATCCTCGAAATCAATAGTTTTGCCCTCCTCCGGACGATTCGTGA
GCAACTACGGCAGTTTAGCTCCCAGGAAGCGGTGGTCTTGGTTGATATTGAATTTGACTGTACCGAAATTGCCATTGTGG
TCGATGGGGTGCCGCAGTTTTCCCGGACAGTACCCATCGGCGCTTCGCAACTACAAAATGCCCTATCCCGCGCCATGAAT
TTACCTGCCCCCCGCGACATCGAACTTCTCCAGGGGATGACCATTCCCAACACACCAATGGAAGGATCGCGCACCGGCGC
CACGGGCATTAACCCTGGGATGGCGGCCCTCCTGCGCGTTCTGGGGGAACTGACAGACGAATTGCGCCGTTCCATTGATT
TTTATCTCAACCAGAGTGGTGAGCTGGAAGTGGCCCAATTGATGCTGGCTGGCCCTGGTGGTGGGATTAGTCAACTGGAT
GAATTTTTTACGCAGCGTCTCAGCATTCCGACGATTCAAATTGATCCGTTTGAGGCGCTGTCTATTGACGTTGATGAAGA
AATTTCCAAGGTGCAACGGCCATCCTTGGGCACTGCATTGGGTTTAGGACTCCGGGAGGTATAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (283-366)

• Type IV pilus assembly protein PilM; (PilM_2) (17-241)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Synechocystis sp. PCC 6803	71.585	99.728	0.714