Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | ASL17_RS08290 | Genome accession | NZ_CP013957 |
| Coordinates | 1670016..1670315 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain V521 isolate Sequencing | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1665016..1675315
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ASL17_RS08265 (ASL17_08270) | gcvPA | 1666228..1667574 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| ASL17_RS08270 (ASL17_08275) | gcvT | 1667594..1668685 (-) | 1092 | WP_000093351.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| ASL17_RS08275 (ASL17_08280) | - | 1668844..1669368 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| ASL17_RS08280 (ASL17_08285) | - | 1669358..1669504 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| ASL17_RS08285 (ASL17_08290) | comGF | 1669601..1670098 (-) | 498 | WP_001803317.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ASL17_RS08290 (ASL17_08295) | comGE | 1670016..1670315 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| ASL17_RS08295 (ASL17_08300) | comGD | 1670302..1670748 (-) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ASL17_RS08300 (ASL17_08305) | comGC | 1670726..1671037 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ASL17_RS08305 (ASL17_08310) | comGB | 1671051..1672121 (-) | 1071 | WP_000775706.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ASL17_RS08310 (ASL17_08315) | comGA | 1672093..1673067 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ASL17_RS08315 (ASL17_08320) | - | 1673119..1673742 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| ASL17_RS08320 (ASL17_08325) | - | 1673739..1674068 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| ASL17_RS08325 (ASL17_08330) | - | 1674068..1675054 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| ASL17_RS08330 (ASL17_08335) | - | 1675051..1675254 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=166656 ASL17_RS08290 WP_000844413.1 1670016..1670315(-) (comGE) [Staphylococcus aureus strain V521 isolate Sequencing]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=166656 ASL17_RS08290 WP_000844413.1 1670016..1670315(-) (comGE) [Staphylococcus aureus strain V521 isolate Sequencing]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |