Detailed information NTG0166498

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: AUL54_RS17510
• Genome accession: NZ_CP013950
• Coordinates: 3577170..3579548 (+)
• Length: 792 a.a.
• NCBI ID: WP_060964667.1
• Uniprot ID: A0AAI8MXR7
• Organism: Bacillus sp. SDLI1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3572170..3584548

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AUL54_RS17485 (AUL54_17495)	-	3572256..3573521 (-)	1266	WP_060964664.1	replication-associated recombination protein A	-
AUL54_RS17490 (AUL54_17500)	cymR	3573716..3574132 (+)	417	WP_003152730.1	cysteine metabolism transcriptional regulator CymR	-
AUL54_RS17495 (AUL54_17505)	-	3574152..3575291 (+)	1140	WP_060964665.1	cysteine desulfurase family protein	-
AUL54_RS17500 (AUL54_17510)	mnmA	3575328..3576443 (+)	1116	WP_060964666.1	tRNA 2-thiouridine(34) synthase MnmA	-
AUL54_RS17505 (AUL54_17515)	-	3576531..3577151 (+)	621	WP_095532179.1	tetratricopeptide repeat protein	-
AUL54_RS17510 (AUL54_17520)	recD2	3577170..3579548 (+)	2379	WP_060964667.1	ATP-dependent RecD-like DNA helicase	Machinery gene
AUL54_RS17515 (AUL54_17525)	-	3579667..3580125 (+)	459	WP_060964668.1	hypothetical protein	-
AUL54_RS17520 (AUL54_17530)	-	3580138..3580329 (+)	192	WP_003152738.1	hypothetical protein	-
AUL54_RS20875	-	3580351..3580482 (+)	132	WP_003152741.1	YrzQ family protein	-
AUL54_RS17525 (AUL54_17535)	-	3580517..3581173 (-)	657	WP_060964669.1	amino acid ABC transporter permease	-
AUL54_RS17530 (AUL54_17540)	-	3581192..3581842 (-)	651	WP_060964670.1	amino acid ABC transporter permease	-
AUL54_RS17535 (AUL54_17545)	-	3581900..3582727 (-)	828	WP_060964671.1	transporter substrate-binding domain-containing protein	-
AUL54_RS17540 (AUL54_17550)	-	3582748..3583476 (-)	729	WP_060964672.1	amino acid ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 792 a.a.
• Molecular weight: 88293.93 Da
• Isoelectric Point: 4.9490

>NTDB_id=166498 AUL54_RS17510 WP_060964667.1 3577170..3579548(+) (recD2) [Bacillus sp. SDLI1]
MDQLNIEEQPYVKGVIHTVIYHNDTNLYTVLKVKVAETSEAIEDKVVSVTGYFPLLQEDETYTFYGKTATHPKFGLQFQA
EHFKKEIPTTKEGIIHYLSSDLFEGIGKKTAEEIVKKLGDGALNKILADASVLYDVPKMSKKKADKLAGELQRHQGLEQI
MISLNQYGFGPQLSMKIYQAYETETLEKIQENPYQLVKDVEGIGFVKADELGGKMGLSGNHPERVKAAILYTIESTCLSE
GHTYIETKQLIINTQTLLNQSAEGGRVTEMDAADGIIALGESKDIVIEGERCYFPSLFYAEQNVAKRVLDIAAQTEYADQ
FPESEFLLALGELEERMNVQYAPSQKDAIQKALSSPMLLLTGGPGTGKTTVIKGIVELYSELHGVSLDPGDYKKDEAFPV
LLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTYNEDQPIEGKLIIIDEASMLDIWLASHFFKALPKHIQLIVVGD
EDQLPSVGPGQVLRDLLASEVLPTVRLTDIYRQAEGSSIVELAHDMKKGLLPKGLTAPTKDRSFIRCNSSQIKEVVDQVV
SNALKKGYTSKDIQVLAPMYRGKAGINELNVLLQDIMNPPKEKRRELKFGDVVYRTGDKILQLVNQPENNVFNGDIGEIV
SIFYAKENTEKEDMVVVSFDGNEITFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAITRAKKF
LILCGEEEALEWGVKNNDATVRQTSLKNRLTEQTEEMDAELAALQKELPFSVYDANIGMEGITPFDFMEEKA

Nucleotide

• Length: 2379 bp

>NTDB_id=166498 AUL54_RS17510 WP_060964667.1 3577170..3579548(+) (recD2) [Bacillus sp. SDLI1]
GTGGATCAGCTGAACATCGAGGAACAGCCGTATGTAAAAGGCGTCATTCATACGGTCATTTACCACAATGACACCAACCT
GTATACAGTGCTGAAAGTCAAGGTTGCAGAAACGTCTGAGGCGATCGAAGACAAGGTCGTATCCGTAACGGGCTACTTCC
CTCTGCTGCAAGAAGATGAGACTTACACATTTTACGGAAAAACCGCCACACACCCCAAGTTCGGCCTGCAATTTCAGGCT
GAACACTTTAAAAAAGAAATTCCGACCACAAAAGAAGGGATCATTCATTATTTATCAAGTGATCTGTTTGAAGGAATCGG
AAAAAAAACCGCGGAAGAAATCGTCAAAAAGCTTGGAGACGGCGCGCTCAATAAAATTCTGGCTGATGCATCGGTGCTTT
ATGATGTGCCGAAAATGTCAAAAAAGAAAGCGGACAAACTGGCGGGAGAGCTGCAGCGGCATCAGGGGCTTGAACAGATT
ATGATTTCTCTGAACCAATACGGTTTCGGACCTCAGCTTTCCATGAAAATTTATCAGGCATACGAAACGGAAACCTTGGA
GAAAATTCAGGAAAATCCTTATCAGCTTGTAAAGGACGTGGAAGGCATCGGTTTTGTTAAAGCCGACGAACTGGGCGGGA
AAATGGGGCTGTCAGGAAACCACCCGGAGCGGGTCAAAGCGGCTATCTTATATACGATTGAATCAACGTGTCTTTCAGAA
GGTCATACGTACATAGAGACAAAGCAGCTGATTATCAATACGCAAACGCTTCTGAATCAGTCAGCTGAAGGCGGCCGCGT
CACGGAAATGGATGCGGCTGACGGCATCATCGCCCTCGGGGAGAGTAAGGACATCGTCATAGAAGGAGAACGCTGCTATT
TTCCGTCTTTGTTTTACGCGGAACAAAACGTCGCAAAACGCGTGCTCGACATTGCGGCCCAGACGGAGTATGCCGATCAG
TTTCCTGAATCGGAATTTCTTCTTGCGCTCGGTGAACTGGAAGAACGGATGAATGTACAATACGCTCCGAGCCAAAAGGA
TGCGATTCAAAAAGCGCTGTCCTCACCGATGCTTTTACTGACCGGGGGACCGGGCACGGGAAAAACGACCGTTATCAAAG
GCATCGTCGAATTGTACAGTGAACTGCACGGAGTATCGCTTGACCCCGGTGATTATAAAAAAGATGAAGCATTTCCGGTG
CTGCTTGCCGCGCCGACCGGAAGAGCCGCAAAGCGAATGAGCGAATCTACGGGTCTGCCGGCTGTTACGATTCACAGGCT
GCTCGGCTGGAATGGCGCTGAAGGCTTTACCTACAATGAAGATCAGCCGATTGAAGGGAAACTGATTATTATAGACGAAG
CGAGTATGCTCGATATTTGGCTCGCCAGCCATTTTTTTAAGGCGCTCCCTAAGCACATTCAGCTTATCGTCGTCGGTGAT
GAAGACCAGCTTCCTTCCGTAGGGCCCGGGCAGGTGCTGAGAGACCTTTTGGCTTCTGAGGTGCTGCCGACCGTGCGTCT
GACAGATATTTATCGTCAGGCCGAAGGGTCATCCATCGTTGAACTTGCCCATGATATGAAAAAGGGACTGCTTCCCAAGG
GGCTGACCGCGCCGACAAAGGACCGCTCGTTTATCCGCTGTAATTCTTCACAAATTAAAGAAGTCGTGGATCAAGTCGTC
TCAAATGCGCTAAAAAAGGGGTATACTTCTAAAGACATTCAAGTGCTCGCGCCGATGTACAGGGGAAAAGCGGGAATTAA
CGAACTGAACGTGCTTCTTCAAGACATCATGAATCCGCCGAAAGAAAAAAGGCGGGAGCTGAAATTCGGAGATGTCGTCT
ACAGGACGGGCGATAAAATATTACAGCTTGTCAACCAGCCGGAAAACAATGTGTTTAACGGAGATATCGGCGAAATCGTG
TCCATTTTTTATGCCAAAGAAAATACGGAAAAAGAAGACATGGTCGTCGTCTCGTTTGACGGGAACGAAATCACCTTTAC
AAAAAAGGATTTCAGCCAGTTTACCCACGCTTACTGCTGTTCCATTCATAAGTCGCAGGGCAGCGAATTTCCGATTGTCG
TCCTGCCTGTCGTCAAAGGCTATTATCGAATGCTCAGGAGAAATCTCCTTTATACCGCCATTACAAGAGCCAAAAAATTT
CTGATTCTTTGCGGAGAAGAAGAAGCGCTTGAATGGGGCGTCAAAAACAATGATGCCACCGTCAGACAGACGTCACTTAA
AAACAGGCTCACAGAGCAGACTGAAGAGATGGATGCAGAACTGGCCGCCCTGCAAAAAGAGCTGCCGTTCAGTGTTTACG
ATGCAAATATCGGAATGGAAGGCATCACGCCTTTTGACTTTATGGAAGAAAAAGCGTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (154-244)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (676-724)

• AAA domain (AAA_30) (341-548)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (589-659)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	89.254	99.874	0.891