Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   AWC37_RS07400 Genome accession   NZ_CP013922
Coordinates   1495203..1496246 (-) Length   347 a.a.
NCBI ID   WP_029378980.1    Uniprot ID   -
Organism   Staphylococcus xylosus strain S170     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1490203..1501246
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AWC37_RS07370 (AWC37_07315) - 1490465..1491703 (-) 1239 WP_038678839.1 aminopeptidase -
  AWC37_RS07375 (AWC37_07320) - 1491721..1491924 (-) 204 WP_017723498.1 DUF1128 family protein -
  AWC37_RS07380 (AWC37_07325) - 1492059..1492523 (+) 465 WP_029378983.1 low molecular weight protein-tyrosine-phosphatase -
  AWC37_RS07385 (AWC37_07330) - 1492530..1492814 (+) 285 WP_029378982.1 hypothetical protein -
  AWC37_RS07390 (AWC37_07335) - 1493170..1494315 (+) 1146 WP_058625640.1 YihY/virulence factor BrkB family protein -
  AWC37_RS07395 (AWC37_07340) vraR 1494584..1495213 (-) 630 WP_017723494.1 response regulator transcription factor Regulator
  AWC37_RS07400 (AWC37_07345) vraS 1495203..1496246 (-) 1044 WP_029378980.1 sensor histidine kinase Regulator
  AWC37_RS07405 (AWC37_07350) liaF 1496243..1496944 (-) 702 WP_029378979.1 cell wall-active antibiotics response protein LiaF -
  AWC37_RS07410 (AWC37_07355) - 1496961..1497347 (-) 387 WP_029378978.1 hypothetical protein -
  AWC37_RS07415 (AWC37_07360) map 1497452..1498204 (-) 753 WP_029378977.1 type I methionyl aminopeptidase -
  AWC37_RS07420 (AWC37_07365) - 1498381..1499367 (+) 987 WP_038678842.1 FUSC family protein -
  AWC37_RS07425 (AWC37_07370) - 1499568..1500290 (-) 723 WP_029378975.1 type 1 glutamine amidotransferase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40071.57 Da        Isoelectric Point: 6.4215

>NTDB_id=166128 AWC37_RS07400 WP_029378980.1 1495203..1496246(-) (vraS) [Staphylococcus xylosus strain S170]
MNHYIRAIGSMLILVYSTFFAIFFIDKVFVNVMYFQGMFYTQIFGIPVLLFLNLMVILLCIIVGSVLAYKINQQNHWLKD
QIERSIEGQTVGINDQNIELYNETIELYQTFVPLNQEVHKLRMKTQNLTNESYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEAPLDQQIPVLEKMIQDSQLEMRALLLHLRPIGLKDKSLGEGIKDLVVDLQKKVPMKVIHDI
EEFKVPKGIEDHLFRITQEAISNTLRHSKGTKVTIELFNRDDYLLLRIQDNGKGFNVDDKVEQSYGLKNMRERALEIGAT
FHIVSLPDAGTRIEVKAPLNKEDSYAD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=166128 AWC37_RS07400 WP_029378980.1 1495203..1496246(-) (vraS) [Staphylococcus xylosus strain S170]
ATGAATCACTACATTAGAGCAATAGGTTCGATGTTGATATTAGTTTATAGTACATTTTTTGCTATATTTTTTATTGATAA
AGTATTTGTTAACGTAATGTACTTTCAAGGTATGTTTTATACCCAAATATTTGGTATACCCGTCTTATTATTTTTAAATT
TAATGGTTATTTTGCTCTGTATTATTGTAGGTTCTGTATTAGCTTATAAAATAAACCAACAAAATCATTGGTTAAAAGAC
CAAATAGAAAGATCAATAGAAGGGCAAACTGTAGGTATAAATGATCAAAATATAGAATTGTATAATGAAACCATTGAGTT
ATATCAAACGTTCGTCCCTTTAAATCAAGAAGTACATAAATTAAGGATGAAAACGCAAAATTTAACTAATGAATCATATA
ATATTAATGATGTAAAAGTGAAAAAAATTATTGAAGATGAACGACAAAGGCTAGCACGTGAATTACATGATTCAGTGAGT
CAGCAGTTGTTCGCAGCAAGCATGATGTTATCAGCAATAAAAGAAACAAAATTAGAGGCACCATTAGATCAGCAAATTCC
GGTACTAGAGAAAATGATTCAAGATTCTCAGCTAGAAATGAGAGCTTTATTACTACATTTAAGACCTATAGGATTGAAAG
ATAAATCACTTGGTGAAGGTATTAAAGACTTAGTTGTAGATCTACAGAAAAAAGTACCGATGAAAGTTATACATGATATA
GAAGAATTTAAAGTACCTAAAGGTATTGAAGATCATTTATTTAGAATCACACAAGAAGCTATATCGAATACATTAAGGCA
TTCAAAGGGAACTAAAGTAACTATAGAGTTATTTAATAGAGATGATTATTTATTATTGAGAATACAAGATAATGGTAAAG
GCTTTAATGTTGATGATAAAGTAGAACAAAGTTATGGCTTAAAAAATATGCGTGAGCGTGCACTTGAGATTGGTGCAACG
TTTCATATTGTGTCACTACCTGATGCAGGTACCAGAATTGAAGTTAAAGCCCCATTAAATAAGGAGGATTCATATGCCGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

88.184

100

0.882


Multiple sequence alignment