Detailed information NTG0165992

Bioinformatically predicted

Overview

• Name: recD/recD2/recDB
• Type: Machinery gene
• Locus tag: A7J08_RS01275
• Genome accession: NZ_CP017088
• Coordinates: 232153..234636 (-)
• Length: 827 a.a.
• NCBI ID: WP_148115638.1
• Uniprot ID: -
• Organism: Streptococcus suis strain SRD478
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 227153..239636

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A7J08_RS10385	-	227470..227631 (+)	162	WP_161947937.1	hypothetical protein	-
A7J08_RS01255 (A7J08_01235)	-	227723..228859 (+)	1137	WP_024383150.1	adenine-specific methyltransferase EcoRI family protein	-
A7J08_RS01260 (A7J08_01240)	-	228863..230026 (+)	1164	WP_024415358.1	DUF262 domain-containing protein	-
A7J08_RS01265 (A7J08_01245)	-	230379..231299 (+)	921	WP_053867388.1	PfkB family carbohydrate kinase	-
A7J08_RS01270 (A7J08_01250)	-	231347..231985 (+)	639	WP_161802365.1	endonuclease III domain-containing protein	-
A7J08_RS01275 (A7J08_01255)	recD/recD2/recDB	232153..234636 (-)	2484	WP_148115638.1	ATP-dependent RecD-like DNA helicase	Machinery gene
A7J08_RS01280 (A7J08_01260)	lepB	234700..235329 (-)	630	WP_053867265.1	signal peptidase I	-
A7J08_RS01285 (A7J08_01265)	rnhC	235339..236229 (-)	891	WP_053867262.1	ribonuclease HIII	-
A7J08_RS01290 (A7J08_01270)	-	236314..237297 (+)	984	WP_053867260.1	Gfo/Idh/MocA family oxidoreductase	-
A7J08_RS01300 (A7J08_01275)	-	237646..238935 (+)	1290	WP_172064102.1	LysM domain-containing protein	-

Sequence

Protein

• Length: 827 a.a.
• Molecular weight: 92985.19 Da
• Isoelectric Point: 4.5786

>NTDB_id=165992 A7J08_RS01275 WP_148115638.1 232153..234636(-) (recD/recD2/recDB) [Streptococcus suis strain SRD478]
MNEVYFTGTIDRIIFENPSNFYKILLLEIEETDADYDDYEIIVTGTIADVIEGEDYRFYGNLVTHPKYGQQLQISRYERS
KPTSAGLVKYFSSEHFKGIGRKTAEKIVELYGEDTIDKILAEPEKLTQITGLSRKNMQAFVEKLRLNYGTELILAKLAEY
GIPNKLAFQIQDQYKEKTLQIIEENPYQLVEDVQGLGFTIADRIAENLGIASDSPQRFRAGMLFSLIHRSMETGDTYVEA
RDLLEATLELLEKSRHTELDPAAVAKELTGLIADDKVQQEGTKIFDNSLYFAEHGIHKKLTRLMGKNGFKPFPRADVEAA
IAELETMSSLTYDDIQKEAIVQAITNPLFILTGGPGTGKTTVINGIIAVYAILHKIDLTRNREECPVLLAAPTGRAARRM
NELTGLPSATIHRHLGLVEGQEESYRDDYLDADFIIVDEFSMVDTWLANQLFQNISSQTQVLIVGDAEQLPSVSPGQVLA
DLLKIDKLPSITLERIYRQSDDSTIVTLASQIRQGVLPSDFREKKADRSYFEAQNEQIPALIERIVGAAIKSGIPANEVQ
ILAPMYRGAAGIDQLNTMTQALLNPLEDGELEFLHNEQAFRQGDRVIHLVNDAEANVFNGDLGYITDLLPAKYTDSKQDE
ITINFDGSEVTYPRNEWYKITLAYAMSIHKSQGSEFQVVILPITRTSHRMLQRNLVYTAITRSKSKLILLGEISAFDYAV
KNAGTVRKTYLVPRFQREMAEQDSKESLTENNESKTATQTQPPAQSDKPKQTEPVTENSQQLSLLDQDQPEKTSGQPREY
ILTVDNLLTIDPMIGIDQADIEEFFKA

Nucleotide

• Length: 2484 bp

>NTDB_id=165992 A7J08_RS01275 WP_148115638.1 232153..234636(-) (recD/recD2/recDB) [Streptococcus suis strain SRD478]
ATGAACGAAGTGTATTTTACCGGTACTATTGACCGGATTATTTTTGAAAATCCTAGTAATTTTTATAAAATCCTTCTCCT
TGAAATTGAGGAGACAGACGCAGACTATGATGACTACGAAATTATTGTGACCGGAACGATTGCCGATGTCATTGAAGGAG
AAGACTATCGTTTCTATGGCAATCTGGTCACCCATCCCAAGTATGGTCAGCAGCTGCAAATTTCGCGTTACGAACGCAGC
AAGCCTACCTCAGCTGGTCTGGTCAAGTATTTCTCCAGCGAGCATTTCAAGGGAATTGGACGCAAAACAGCTGAAAAAAT
CGTTGAGCTCTATGGCGAAGATACCATTGATAAGATTTTGGCCGAACCTGAAAAACTAACCCAAATCACAGGTCTATCCC
GTAAGAACATGCAGGCATTTGTAGAGAAACTCCGCCTCAATTATGGAACCGAGTTGATCTTGGCAAAACTAGCCGAGTAT
GGCATTCCCAATAAATTGGCCTTTCAAATCCAAGACCAGTATAAGGAAAAAACACTTCAGATTATTGAAGAAAATCCCTA
TCAACTGGTCGAAGATGTCCAGGGGCTCGGCTTTACCATTGCCGATAGGATTGCGGAAAATCTAGGAATTGCCAGTGATT
CACCCCAACGTTTTCGGGCTGGCATGCTCTTTAGTCTCATTCATCGCTCCATGGAAACAGGCGATACCTATGTGGAGGCC
AGAGACTTGCTGGAAGCAACCCTTGAACTGCTGGAAAAATCCCGCCATACAGAGCTGGATCCCGCTGCTGTTGCCAAAGA
ATTGACGGGACTGATTGCAGACGACAAGGTACAGCAAGAAGGCACAAAGATTTTTGACAACAGCCTCTACTTTGCCGAAC
ATGGTATCCATAAAAAACTGACCCGTCTGATGGGAAAAAATGGTTTCAAACCCTTCCCACGCGCAGACGTTGAGGCTGCC
ATAGCAGAGCTGGAAACTATGTCTTCCCTGACCTACGATGACATTCAAAAAGAAGCCATCGTCCAAGCCATTACCAATCC
GCTTTTCATTCTGACAGGCGGACCAGGGACTGGAAAAACAACCGTCATCAACGGCATTATCGCAGTCTATGCCATCTTGC
ATAAGATTGACCTGACTCGCAACCGAGAAGAATGCCCTGTCCTCCTAGCCGCTCCAACTGGACGAGCAGCCAGACGGATG
AATGAATTGACAGGCCTGCCTTCCGCCACCATCCACCGCCATCTCGGTCTGGTAGAAGGACAGGAAGAATCCTACCGTGA
TGATTATTTGGATGCCGACTTTATCATCGTGGATGAGTTTTCTATGGTAGATACTTGGTTGGCAAACCAGCTCTTCCAGA
ACATCTCCTCCCAGACCCAAGTTCTGATTGTCGGCGATGCGGAGCAATTACCTTCTGTCAGTCCCGGTCAGGTCCTAGCT
GACCTCTTGAAAATTGACAAGCTACCCAGCATCACTCTAGAACGCATCTACCGTCAATCCGATGATTCGACCATTGTTAC
CCTAGCCAGCCAGATTCGCCAAGGGGTCCTGCCGAGCGATTTCCGTGAGAAAAAGGCTGACCGCTCCTATTTTGAAGCGC
AAAACGAACAAATTCCAGCTCTGATTGAACGCATTGTCGGAGCAGCTATCAAGTCAGGTATCCCTGCAAACGAAGTCCAA
ATCCTCGCTCCCATGTACCGTGGGGCCGCAGGCATTGACCAACTCAACACCATGACCCAGGCCCTGCTCAATCCCCTAGA
AGACGGAGAGCTGGAATTCCTCCACAACGAGCAGGCCTTTCGTCAAGGCGACCGAGTCATCCATTTGGTCAACGATGCCG
AGGCCAACGTCTTCAATGGTGATTTGGGCTACATCACCGACCTCTTGCCTGCCAAGTACACCGACTCCAAGCAGGACGAG
ATTACCATTAACTTCGACGGTAGCGAGGTCACCTATCCCCGTAACGAATGGTACAAGATTACCCTGGCCTATGCCATGTC
CATCCACAAGTCCCAAGGCAGTGAGTTCCAGGTGGTCATCCTTCCCATTACCCGCACCAGCCACCGCATGCTCCAGCGCA
ACCTGGTCTACACCGCCATCACCCGCTCCAAGAGCAAGCTCATCCTCCTAGGCGAAATCTCCGCCTTCGACTACGCCGTC
AAAAACGCCGGCACCGTCCGAAAAACCTATCTGGTCCCACGTTTCCAAAGGGAAATGGCAGAGCAGGACAGTAAGGAAAG
CCTGACTGAAAACAACGAAAGCAAAACAGCCACACAAACCCAGCCCCCTGCCCAGTCAGATAAGCCAAAACAAACAGAGC
CCGTAACAGAAAACAGCCAACAACTGTCCCTTCTTGACCAAGACCAGCCAGAAAAAACAAGTGGACAACCCAGAGAATAT
ATTCTGACTGTGGACAACCTGCTAACCATCGACCCCATGATCGGCATAGATCAGGCAGATATTGAAGAGTTTTTTAAAGC
ATAG

Domains

Predicted by InterProScan.

• AAA domain (AAA_30) (332-528)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (663-710)

• Helix-hairpin-helix domain (HHH_5) (97-145)

• Helix-hairpin-helix containing domain (HHH_RecD2) (148-237)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (575-645)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD/recD2/recDB	Bacillus subtilis subsp. subtilis str. 168	41.402	91.415	0.378