Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   BGL51_RS08155 Genome accession   NZ_CP017064
Coordinates   1535922..1536665 (-) Length   247 a.a.
NCBI ID   WP_011681551.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain ST3     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1530922..1541665
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BGL51_RS08125 (BGL51_08005) - 1531187..1532137 (-) 951 WP_084829064.1 TIGR01212 family radical SAM protein -
  BGL51_RS08130 (BGL51_08010) sepM 1532222..1533298 (-) 1077 WP_171815041.1 SepM family pheromone-processing serine protease Regulator
  BGL51_RS08135 (BGL51_08015) coaD 1533276..1533773 (-) 498 WP_095559436.1 pantetheine-phosphate adenylyltransferase -
  BGL51_RS08140 (BGL51_08020) rsmD 1533807..1534406 (-) 600 Protein_1509 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  BGL51_RS08145 (BGL51_08025) trxB 1534497..1535450 (-) 954 WP_255136104.1 thioredoxin-disulfide reductase -
  BGL51_RS08150 (BGL51_08030) - 1535483..1535707 (-) 225 WP_002951743.1 DUF4059 family protein -
  BGL51_RS08155 (BGL51_08035) amiE 1535922..1536665 (-) 744 WP_011681551.1 amino acid ABC transporter ATP-binding protein Regulator
  BGL51_RS08160 (BGL51_08040) - 1536665..1537411 (-) 747 WP_095559509.1 amino acid ABC transporter permease -
  BGL51_RS08165 (BGL51_08045) - 1537799..1538629 (-) 831 WP_011681553.1 transporter substrate-binding domain-containing protein -
  BGL51_RS08170 (BGL51_08050) - 1539089..1539322 (-) 234 WP_002947030.1 hypothetical protein -
  BGL51_RS08175 (BGL51_08055) dinB 1539620..1540723 (-) 1104 WP_095559437.1 DNA polymerase IV -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27661.80 Da        Isoelectric Point: 5.7813

>NTDB_id=165945 BGL51_RS08155 WP_011681551.1 1535922..1536665(-) (amiE) [Streptococcus thermophilus strain ST3]
MISIKNVTKEFSGQKVLDGIDIDIEKGEVVALVGASGAGKSTILRCLNYLEQPDSGTIAIDDFKVDFGTITKEQILTLRR
KLAMVFQQFNLFERRTALDNVKEGLKIVKKLSDEEATKIAKEELAKVGLSNRENYYPRHLSGGQKQRVALARALAMRPDV
LLLDEPTSALDPELVGEVEKSIVDAAKSGQTMILVSHDMNFIYQVADKVLFLEKGHILEQGTPDEIFNHPKEERTKEFFA
SYSKQYL

Nucleotide


Download         Length: 744 bp        

>NTDB_id=165945 BGL51_RS08155 WP_011681551.1 1535922..1536665(-) (amiE) [Streptococcus thermophilus strain ST3]
ATGATTAGTATCAAAAATGTGACCAAGGAATTTTCAGGACAAAAGGTTCTCGATGGCATCGATATTGACATTGAAAAAGG
TGAAGTTGTGGCTCTTGTTGGTGCCTCTGGTGCAGGGAAGTCGACTATCCTTCGTTGCTTGAACTATTTGGAACAACCTG
ATTCTGGTACTATTGCCATTGATGATTTCAAGGTGGATTTTGGAACAATTACCAAGGAGCAAATCCTTACCCTTCGCCGT
AAGTTGGCTATGGTTTTCCAACAGTTTAACCTCTTTGAACGTCGTACAGCCTTGGATAATGTTAAGGAAGGTCTTAAGAT
TGTTAAGAAACTTTCTGACGAAGAAGCTACCAAGATTGCGAAAGAAGAGCTCGCTAAGGTTGGGCTTTCTAATCGTGAAA
ATTACTACCCACGTCACTTGTCGGGTGGTCAAAAGCAACGTGTGGCTTTGGCTCGTGCCCTTGCAATGAGGCCTGATGTG
CTCTTGCTTGACGAACCAACATCTGCCCTTGACCCTGAGTTGGTTGGTGAGGTTGAAAAATCAATCGTAGATGCGGCTAA
ATCAGGTCAAACCATGATTTTGGTCAGTCACGACATGAACTTTATTTATCAAGTGGCTGACAAGGTGCTTTTCCTTGAAA
AAGGTCATATCCTTGAACAAGGAACACCTGATGAAATCTTTAACCATCCAAAAGAAGAGCGAACAAAAGAATTCTTCGCT
TCTTATTCAAAACAATATCTTTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(17-168)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

33.962

100

0.364

Multiple sequence alignment