Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   BSHJ0_RS04370 Genome accession   NZ_CP016894
Coordinates   855193..857007 (+) Length   604 a.a.
NCBI ID   WP_038427534.1    Uniprot ID   -
Organism   Bacillus subtilis strain HJ0-6     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 850193..862007
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSHJ0_RS04360 (BSHJ0_00850) - 850730..853063 (+) 2334 WP_038427533.1 peptidase G2 autoproteolytic cleavage domain-containing protein -
  BSHJ0_RS04365 (BSHJ0_00851) yfiB 853478..855199 (+) 1722 WP_029726857.1 ABC transporter ATP-binding protein -
  BSHJ0_RS04370 (BSHJ0_00852) rcrQ 855193..857007 (+) 1815 WP_038427534.1 ABC transporter ATP-binding protein Regulator
  BSHJ0_RS04375 (BSHJ0_00853) catD 857161..857565 (+) 405 WP_015252533.1 DoxX family oxidoreductase CatD -
  BSHJ0_RS04380 (BSHJ0_00854) catE 857583..858440 (+) 858 WP_003233597.1 catechol 2,3-dioxygenase -
  BSHJ0_RS04385 (BSHJ0_00856) lnrJ 858558..859760 (+) 1203 WP_015715521.1 two-component system sensor histidine kinase LnrJ -
  BSHJ0_RS04390 (BSHJ0_00857) lnrK 859757..860419 (+) 663 WP_015715522.1 two-component system response regulator LnrK -
  BSHJ0_RS04395 (BSHJ0_00858) lnrL 860563..861498 (+) 936 WP_003233591.1 linearmycin resistance ATP-binding protein LnrL -

Sequence

Protein


Download         Length: 604 a.a.        Molecular weight: 67383.20 Da        Isoelectric Point: 9.7696

>NTDB_id=165115 BSHJ0_RS04370 WP_038427534.1 855193..857007(+) (rcrQ) [Bacillus subtilis strain HJ0-6]
MLKDIRKPFQYPKLPIDKKEGAKKRAKAKDTKGTLRRIWSYLAERKGLLILVMLMVVISAIFGLLGPFVIGKAIDHFIVG
KTVSGLIPVLLLLLAIYIIQSLSLWFQNYWMITISQGTVFRMRSELFTHLHELPIPFFDKQRHGELMSRVTNDIENVSST
LNTSVIQILSSVITFAGTIAVMLYMSPLLTLITLTIIPVMAASLKWITNRTGKLFKEQQKNLGDLNGYIEESVSGAKVIK
AYSREKQITAEFLEKNAALKTSGFWAQTISGFIPKVMNSLNNLSFTMIAAIGGLFALKGWISIGSIVVFAEYSRQFTRPL
NDLANQFNTMLSAIAGAERVFDVLDEKEEREDEKNAVHQPIQTGSIEFRDVSFGYDKGQQTLKHLQFTVPAGQSIAFVGP
TGAGKTTVTNLLARFYEPDKGKILIDGTDIKTLTRASLRKNMGFVLQDSFLFQGTIRENIRYGRLDASDQEVEAAAKTAN
AHSFIERLPKGYDTVLTQNGSGISQGQKQLISIARAVLADPVLLILDEATSNIDTVTEVNIQEALARLMEGRTSVIIAHR
LNTIQRADQIVVLKDGEMIEKGSHDELIRQKGFYSDLYESQFEK

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=165115 BSHJ0_RS04370 WP_038427534.1 855193..857007(+) (rcrQ) [Bacillus subtilis strain HJ0-6]
ATGCTAAAAGACATCCGCAAGCCTTTCCAATATCCCAAACTGCCAATTGACAAAAAAGAAGGCGCGAAAAAGCGGGCGAA
AGCAAAGGATACAAAGGGCACACTGAGACGAATCTGGTCTTACTTGGCTGAAAGAAAAGGACTGCTCATACTTGTCATGC
TAATGGTTGTCATCAGCGCCATATTCGGACTCCTTGGTCCCTTTGTGATCGGAAAGGCCATTGACCATTTTATCGTCGGG
AAAACGGTCAGCGGCTTGATTCCCGTTTTGCTTCTTCTGCTTGCTATCTATATCATTCAGTCCCTGTCGCTTTGGTTTCA
AAACTATTGGATGATTACGATCTCGCAGGGCACGGTTTTCAGAATGAGAAGCGAATTGTTCACCCATCTGCATGAGCTGC
CAATTCCGTTTTTTGATAAACAGCGGCACGGCGAGCTGATGAGCCGGGTGACGAATGACATCGAAAATGTCAGTTCTACC
TTAAATACGTCAGTCATTCAAATTTTGTCAAGCGTGATCACCTTTGCCGGGACCATTGCAGTGATGCTGTACATGAGCCC
GCTCCTTACATTGATTACGCTGACCATTATTCCGGTGATGGCAGCGAGCCTGAAATGGATCACCAACCGAACGGGAAAGC
TGTTTAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAA
GCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCA
GACGATTTCCGGGTTTATTCCGAAGGTCATGAACTCTTTGAATAACTTAAGCTTTACAATGATTGCGGCAATCGGCGGTT
TGTTTGCGCTGAAAGGCTGGATCTCGATCGGCTCCATCGTCGTCTTTGCCGAGTATTCAAGACAATTTACACGCCCTTTA
AACGATCTGGCCAACCAGTTTAATACGATGCTGTCCGCAATCGCCGGCGCTGAACGGGTGTTTGACGTGCTTGATGAAAA
AGAAGAGCGCGAGGATGAAAAGAACGCCGTGCATCAGCCCATCCAAACAGGCAGCATTGAATTCCGGGATGTGTCCTTCG
GTTACGATAAAGGGCAGCAGACACTGAAGCATTTACAGTTTACCGTGCCTGCAGGGCAGTCCATCGCGTTTGTCGGGCCG
ACGGGGGCGGGAAAGACAACCGTCACTAACCTTCTCGCCCGTTTTTACGAGCCTGACAAAGGAAAAATTTTAATCGATGG
TACAGATATTAAAACTCTTACCAGAGCAAGCCTGAGAAAAAACATGGGGTTTGTTCTTCAGGATTCTTTCTTATTTCAGG
GAACGATCAGAGAAAACATTCGCTACGGCAGGCTTGATGCTTCTGATCAGGAAGTCGAAGCCGCTGCAAAAACAGCGAAT
GCCCATAGTTTTATTGAAAGGCTGCCAAAAGGGTATGACACCGTGCTGACGCAAAACGGTTCGGGCATCAGTCAAGGACA
GAAGCAGTTGATTTCTATAGCGAGGGCGGTGCTTGCCGATCCGGTTCTTCTCATTTTGGATGAAGCGACAAGCAACATTG
ATACCGTTACAGAAGTCAACATTCAAGAAGCGCTCGCCCGTTTAATGGAAGGAAGAACAAGCGTCATCATTGCCCACAGG
CTGAACACCATTCAAAGAGCGGACCAGATTGTGGTGCTAAAAGACGGTGAAATGATTGAAAAAGGCAGCCATGACGAGCT
GATTCGGCAAAAAGGATTTTACAGTGACTTATATGAAAGCCAATTTGAGAAATAG

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(49-320)

ABC transporter (ABC_tran)

(382-531)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

39.655

96.026

0.381

Multiple sequence alignment