Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   A6L50_RS07415 Genome accession   NZ_CP016680
Coordinates   1418625..1419593 (+) Length   322 a.a.
NCBI ID   WP_002258732.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M22822     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1413625..1424593
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6L50_RS07405 (A6L50_07405) fetA 1414438..1416609 (+) 2172 WP_016670870.1 TonB-dependent siderophore receptor FetA/FrpB -
  A6L50_RS07410 (A6L50_07410) - 1417326..1418291 (+) 966 WP_002258731.1 siderophore ABC transporter substrate-binding protein -
  A6L50_RS15745 - 1418377..1418484 (-) 108 Protein_1367 IS5/IS1182 family transposase -
  A6L50_RS07415 (A6L50_07415) ceuB 1418625..1419593 (+) 969 WP_002258732.1 ABC transporter permease Machinery gene
  A6L50_RS07420 (A6L50_07420) - 1419583..1420557 (+) 975 WP_002221668.1 iron chelate uptake ABC transporter family permease subunit -
  A6L50_RS07425 (A6L50_07425) - 1420601..1421227 (+) 627 WP_002258733.1 FmdE family protein -
  A6L50_RS07430 (A6L50_07430) - 1421310..1422068 (+) 759 WP_002226767.1 ABC transporter ATP-binding protein -
  A6L50_RS07435 (A6L50_07435) - 1422360..1422833 (+) 474 Protein_1372 autotransporter adhesin NadA -
  A6L50_RS07450 (A6L50_07450) - 1423676..1424422 (+) 747 Protein_1374 YadA C-terminal domain-containing protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 34395.71 Da        Isoelectric Point: 9.9038

>NTDB_id=163530 A6L50_RS07415 WP_002258732.1 1418625..1419593(+) (ceuB) [Neisseria meningitidis strain M22822]
MTAKPFSLNLTNLLLLAVLFAVSLSVGVADFRWSDVFSLSDSQQVMFISRLPRTFAIVLTGASMAVAGMIMQILMRNRFV
EPSMAGAGQSAALGLLLMSLLLPAAPLPVKMSVAAVAALIGMLVFMLLIRRLPPTAQLMVPLVGIIFGGVVEAVATFIAY
ENEMLQMLGVWQQGDFSGVLLGRYELLWITGGLAVFAYLIADRLTILGLGETVSVNLGLNRTAVLWSGLIIVALITSLVI
VTVGNIPFIGLVVPNIISRLMGDKLRQSLPAVALLGASLVLLCDIIGRVIVFPFEIPVSTVFGVLGTALFLWLLLRKPAY
AV

Nucleotide


Download         Length: 969 bp        

>NTDB_id=163530 A6L50_RS07415 WP_002258732.1 1418625..1419593(+) (ceuB) [Neisseria meningitidis strain M22822]
ATGACTGCCAAACCTTTTTCCCTCAACCTGACCAACCTCCTGCTGCTGGCGGTGTTGTTTGCCGTCAGCCTGTCGGTCGG
CGTTGCCGATTTCCGCTGGTCGGATGTGTTTTCGCTGTCGGACAGCCAGCAGGTTATGTTCATCAGCCGCCTGCCGCGCA
CGTTTGCGATTGTGCTGACGGGCGCGTCGATGGCGGTGGCGGGGATGATTATGCAGATTCTGATGCGTAACCGTTTTGTC
GAACCTTCTATGGCGGGCGCGGGTCAGAGTGCGGCTTTGGGTTTGCTTCTGATGTCCCTGCTGCTGCCTGCCGCGCCGCT
GCCGGTCAAAATGTCGGTTGCCGCCGTTGCCGCGTTAATCGGGATGCTGGTGTTTATGCTGCTGATCCGCCGTCTGCCGC
CGACCGCGCAACTGATGGTGCCGCTGGTCGGGATTATTTTCGGCGGCGTGGTTGAGGCGGTGGCGACCTTTATCGCGTAT
GAAAACGAAATGCTGCAAATGCTCGGCGTGTGGCAGCAGGGCGATTTTTCAGGCGTACTGCTGGGGCGGTACGAGCTGCT
TTGGATTACGGGCGGTTTGGCGGTGTTTGCCTATCTGATTGCCGACCGGCTGACGATTTTGGGGCTGGGCGAGACGGTCA
GCGTGAATTTGGGTTTGAACCGGACGGCGGTGTTGTGGTCGGGGCTGATTATTGTGGCTTTGATTACGTCGCTGGTTATC
GTTACGGTCGGCAATATCCCGTTTATCGGGCTGGTCGTGCCGAACATCATCAGCCGCCTGATGGGCGACAAGCTGCGACA
AAGCCTGCCTGCGGTGGCCTTGCTGGGCGCATCTTTGGTGTTGCTGTGCGATATTATCGGACGCGTGATTGTGTTTCCGT
TTGAAATTCCGGTCTCTACGGTTTTTGGTGTATTGGGTACGGCTTTGTTTTTGTGGCTTTTGTTGAGGAAACCCGCCTAT
GCCGTCTGA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(15-316)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

41.86

93.478

0.391

Multiple sequence alignment