Detailed information    

insolico Bioinformatically predicted

Overview


Name   brsM   Type   Regulator
Locus tag   APQ13_RS08045 Genome accession   NZ_CP013237
Coordinates   1668926..1669372 (-) Length   148 a.a.
NCBI ID   WP_002262388.1    Uniprot ID   -
Organism   Streptococcus mutans strain NG8 isolate Dental Plaque     
Function   repress competence development; negative regulate BrsR activity (predicted from homology)   
Competence regulation

Genomic Context


Location: 1663926..1674372
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  APQ13_RS08020 (APQ13_08005) - 1664281..1664841 (+) 561 WP_002266114.1 DNA-3-methyladenine glycosylase I -
  APQ13_RS08025 (APQ13_08010) cinA 1664990..1666246 (+) 1257 WP_002270966.1 competence/damage-inducible protein A Machinery gene
  APQ13_RS08030 (APQ13_08015) recA 1666286..1667437 (+) 1152 WP_002262392.1 recombinase RecA Machinery gene
  APQ13_RS08035 (APQ13_08020) spx 1667522..1667920 (+) 399 WP_002262391.1 transcriptional regulator Spx -
  APQ13_RS08040 (APQ13_08025) - 1668171..1668596 (+) 426 WP_002262390.1 hypothetical protein -
  APQ13_RS10055 - 1668723..1668935 (+) 213 WP_002262389.1 hypothetical protein -
  APQ13_RS08045 (APQ13_08030) brsM 1668926..1669372 (-) 447 WP_002262388.1 bacteriocin genes regulator BrsM Regulator
  APQ13_RS08050 (APQ13_08035) brsR 1669385..1669819 (-) 435 WP_002262387.1 bacteriocin genes transcriptional regulator BrsR Regulator
  APQ13_RS08055 (APQ13_08040) - 1669987..1670256 (+) 270 WP_002262386.1 IreB family regulatory phosphoprotein -
  APQ13_RS08060 (APQ13_08045) ruvX 1670253..1670672 (+) 420 WP_002262385.1 Holliday junction resolvase RuvX -
  APQ13_RS08065 (APQ13_08050) - 1670753..1671052 (+) 300 WP_002262384.1 DUF1292 domain-containing protein -
  APQ13_RS08075 (APQ13_08060) - 1671286..1672857 (+) 1572 WP_002264553.1 membrane protein -

Sequence


Protein


Download         Length: 148 a.a.        Molecular weight: 17106.61 Da        Isoelectric Point: 10.1992

>NTDB_id=161000 APQ13_RS08045 WP_002262388.1 1668926..1669372(-) (brsM) [Streptococcus mutans strain NG8 isolate Dental Plaque]
MKILKQIITYSFIGIGIGSLMNYFIAIFFFPNSNPLGVPSFVQLFSSVSQATAVQLFIFALLGVLQGFASSLFKNEKLSL
LTTSLIHYLFIVLPLLLAGSYLHWFYMTRKYFVFSFLLVSIIYILIYLFCYFENKKNIQKINKKLHQI

Nucleotide


Download         Length: 447 bp        

>NTDB_id=161000 APQ13_RS08045 WP_002262388.1 1668926..1669372(-) (brsM) [Streptococcus mutans strain NG8 isolate Dental Plaque]
ATGAAAATACTCAAACAGATTATTACTTACAGTTTTATTGGTATAGGAATCGGTTCTTTAATGAATTATTTCATAGCCAT
CTTCTTTTTCCCAAATAGTAATCCACTTGGTGTCCCAAGTTTTGTTCAACTTTTTTCATCAGTTTCACAGGCAACAGCAG
TCCAACTTTTCATTTTTGCTCTTCTAGGCGTTTTACAAGGATTTGCTAGCAGCCTCTTTAAAAATGAAAAACTCAGTCTA
CTAACCACAAGCTTGATTCACTATTTATTCATTGTCCTACCACTTCTCTTAGCCGGATCTTATTTACACTGGTTTTACAT
GACTCGGAAATATTTCGTTTTTTCTTTCCTTTTAGTTTCTATTATTTATATACTCATTTACTTATTCTGCTATTTTGAAA
ATAAAAAAAACATTCAAAAAATCAATAAGAAGCTGCATCAAATATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  brsM Streptococcus mutans UA159

100

100

1


Multiple sequence alignment